Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1478g0001 ATGATTCAAGGAAGCAACAGAAGGATTGCTGTGAAGACGCTAGACATTGTTGTTGATGGAGAGAAAGAATTTCAAACTAAAATCACTACAATTGGTCAAACTCATCACAGAAATCTAGTTCAGCACATTGGTTATTGCATTGATGGTTCAAGAGAGCTTCTTGTCTATGAATATATGAGCAACGGATCTTTAGCAGATTTTTTGTTCAAGTGTAATATACGTCTATCTTGGAAACAAAGAGTCAAGATTGCATTGGATGTAGCAAAAGGAGTCTTATATCTTCATGATGAATGTGAAGTTTGTATTGTCCATTGCAACATCAAGCCCCAAAACATACTCATGGACGAAGTATGGACAGCAAAAATATCTGATTTTGGATTTGCAAGGCTATCAATGCCAGAACATTCAAGAGCCACAACAATAGATGAATCAACAAGTGGCTACATGGCACCTGGACGGCATAAAGATGCATTGGCATCAATTAAAATAGACATCTATAGTTATGGTGTGGTGCTGTTGGAGATTATATGTTGCAGAAGGAATATAGATATCAATGTTTTATCAGAAGAGGAACTAATTCTTTTAAGTTGGGTGTATAATTGCTTTGTGAAAGGGGAATTGAGCAAACTAGTAGTGGATGATGAAGATGTGGAGTGGAAGACGATGGAGAGAATGGTGATTGTAGACTTATGGTGTGTCCAGGAAGACTTGTCTTTACGTCCTTCAATGAGGAAAGTGATACTGATGCTTGAAGGTTTAAAGGAAATTCCAATTCCTCCATCTCCAACCCCTTGTTTGATCTTTTATGAATTAATTAATTTAATTTTGTATTCATCTTTAAGTTTGAATTTTCATGTGTGA 861 0.3624 MIQGSNRRIAVKTLDIVVDGEKEFQTKITTIGQTHHRNLVQHIGYCIDGSRELLVYEYMSNGSLADFLFKCNIRLSWKQRVKIALDVAKGVLYLHDECEVCIVHCNIKPQNILMDEVWTAKISDFGFARLSMPEHSRATTIDESTSGYMAPGRHKDALASIKIDIYSYGVVLLEIICCRRNIDINVLSEEELILLSWVYNCFVKGELSKLVVDDEDVEWKTMERMVIVDLWCVQEDLSLRPSMRKVILMLEGLKEIPIPPSPTPCLIFYELINLILYSSLSLNFHV 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1478g0001 286 SUPERFAMILY Protein kinase-like (PK-like) 5 251 IPR011009 -
Prci1478g0001 286 FunFam Putative receptor-like protein kinase 59 258 - -
Prci1478g0001 286 Gene3D Phosphorylase Kinase; domain 1 2 59 - -
Prci1478g0001 286 Pfam Protein tyrosine and serine/threonine kinase 5 247 IPR001245 GO:0004672|GO:0006468
Prci1478g0001 286 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 5 262 - -
Prci1478g0001 286 Gene3D Transferase(Phosphotransferase) domain 1 60 261 - -
Prci1478g0001 286 ProSiteProfiles Protein kinase domain profile. 1 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1478g0001 286 PIRSF ILK 3 257 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1478g0001 7 268 Receptor kinase-like Gene Family AT3G53380 37.500 6.82e-52 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Prci1478g0001 PK_Tyr_Ser-Thr 2.5e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1478g0001 - - pcin:129300214 568.155