Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1468g0003 ATGGATGTCGATTCCTCGATGCCCCCGGAAAGCGATCACGATCGTGCCGTGCAAAATCATACTGCTAGTCAGGCTCCTGCAGCTATGGATAGAGGAGAGCCAGGTGAGCAGCCGTCGTCCGGAGGCGGCTCTCAGGCAGAGTCGCCAGTGCAGCAGCAACAACAGCAGCAGCAGGCGGCTGAGCAGGTGCAGCAGAGTCCGGTGGTTGGACCTAGGCTGGCGCCAACTTACACTGTCGTGAATGCAATTTTGGAAAAGGAAGAGGATGGGCCAGGGCCGAGGTGCGGCCACACTTTGACAGCGGTGGCAGCTGTTGGAGAGGAGGGTACATCTGGATACATTGGTCCGAGGCTGATTTTGTTTGGTGGTGCCACTGCACTTGAAGGGAATTCTGCTGCTGCTGGGACCCCTTCATCCGCCGGGAATGCTGGCATACGTTTAGCTGGTGCCACAGCTGATGTTCACTGTTATGATGTCTTGACTAATAAATGGTCTAGGATAACTCCCTATGGAGAACCTCCAACCCCCAGGGCTGCACATGTGGCAACTGCTGTAGGAACGATGGTAGTTATTCAGGGTGGCATTGGTCCTGCTGGTTTGTCGGCAGAGGACCTTCATGTTCTTGATCTCACTCAGCAACGGCCACGATGGCATAGAGTTGTTGTCCAAGGCCCAGGACCGGGGCCACGTTATGGACATGTGATGGCTTTAGTGGGGCAGAGGTATCTAATGGCAATTGGAGGAAACGATGGAAAAAGACCTTTGGCTGATGTATGGGCCTTGGACACAGCTGCCAAGCCTTATGAATGGCATAAATTGGAGCCAGAAGGAGAAGGCCCACCACCATGCATGTATGCAACTGCCAGTGCACGCTCTGATGGGCTTCTTCTGCTCTGTGGAGGAAGGGATGCCAATAGTGTACCATTGGCTAGTGCATATGGACTTGCAAAGCATAGGGATGGTCGATGGGAATGGGCAATTGCCCCTGGTGTTTCACCATCTCCAAGATATCAGCATGCAGCAGTATTCGTTAATGCAAGGCTCCATGTTTCTGGAGGAGCTCTTGGTGGAGGGCGCATGGTAGAAGACTCATCAAGTGTTGCAGTGTTGGATACTGCTGCTGGTGTTTGGTGTGATACCAAATCTGTTGTTACCAGTCCAAGAACTGGTAGATACAGTGCTGATGCAGCTGGTGGAGATGCCTCAGTTGAATTGACACGGCGATGTAGGCATGCAGCTGCTGCCATCGGTGACCTTATTTTTATTTATGGTGGTTTACGTGGAGGAGTATTGCTTGATGACCTACTTGTTGCTGAAGATCTTGCTGCTGCTGAAACAACAAATGCTGCTTCGCATGCTGCTGCTGCAGCGGCTGCATCTAATGTACAAGCAGGACGATTACCTGGGCCATATGGATTTGTTGATGATAGGAACAGGCAAACAATGTCTGAAGCAACTGCTGATGGTTCAGTTGTTCTAGGAAATCCTGTGGCTCCCCCTATAAATGGTGACATGTATACTGATATCAGCACTGAGAATGCCATGCTCCAGGGACCCCGGAGAACTAGTAAAGGTGTTGAGTATCTGGTTGAAGCATCAGCAGCAGAAGCTGAAGCTATAAGTGCCACATTAGCTGCTGCTAAAGCACGACAAGAGAATGGAGAAGTTGAATTACCTGACAGAGACCGTGGGGCTGAGGCTACACCTAGTGGGAAACCAATATCTTCCCTGATTAGGCCTGATTCAGCAGGACCAAATAATATTGTTCCTGGTGGAGTTCGGCTGCATCATAGAGCTGTTGTCATAGCTGCAGAGACTGGTGGAGCATTAGGCGGTATGGTTAGACAGCTTTCAATTGATCAGTTTGAAAATGAAGGCAGGCGAGTCAGTTATGGAACTCCAGAAAGTGCAACTGCAGCTAGAAAATTATTAGACCGGCAGATGTCCATCAATAGTGTCCCAAAGAAGGTCATAGCTCACCTGTTAAAACCTCGTGGCTGGAAACCACCTGTTCGCCGACAGTTTTTCTTAGACTGCAATGAAATTGCAGATCTTTGTGATAGTGCAGAGCGGATATTTTCAAGTGAACCAACTGTTTTACAACTTAAGGCACCAATTAAAATATTTGGTGATTTACATGGGCAGTTTGGGGATCTTATGCGTCTCTTTGATGAATATGGTGCACCATCAACTGCTGGTGACATAGCATATATCGATTATCTATTCCTAGGAGATTATGTTGACCGGGGCCAACACAGCCTGGAAACTATAACTCTTCTGCTTGCTCTGAAGGTTGAATATCCCAACAGTGTGCATTTAATACGTGGAAATCATGAAGCTGCAGATATTAATGCCCTTTTTGGTTTCAGAATTGAGTGCATTGAAAGGATGGGTGAGAGAGATGGAATTTGGGCATGGCATCGCATTAATCGTTTGTTTAATTGGCTTCCCCTTGCGGCCCTAATCGAGAAAAAGATTATTTGCATGCATGGTGGTATTGGTCGTTCAATAAATCATGTGGAACAGATTGAGAATCTTCAGCGTCCAATTACAATGGAAGCCGGGTCAATTGTGCTGATGGATCTATTATGGTCTGATCCTACAGAAAATGATAGTGTAGAAGGACTGCGGCCAAATGCTAGGGGTCCAGGGTTAGTTACTTTTGGGCCTGATCGTGTCATGGAATTCTGCAACAATAACGATCTTCAGCTGATTGTTCGTGCTCATGAATGTGTGATGGATGGCTTTGAGCGTTTTGCTCAGGGACATTTGATCACTCTATTCTCAGCTACAAATTACTGTGGTACTGCAAATAATGCTGGGGCGATATTAGTATTGGGCAGAGATCTTGTTGTGGTTCCTAAGTTGATTCATCCATTGCCACCTGCACTCTCTTCCCCGGAAGCATCACCAGAACGTCATATTGAAGATACATGGATGCAGGAGTTGAATGCTAATAGACCGCCGACTCCAACTAGAGGTCGTCCTCAAGTTGCTAACGATCGAGGTTCCCTTGCCTGGATATAA 3027 0.4797 MDVDSSMPPESDHDRAVQNHTASQAPAAMDRGEPGEQPSSGGGSQAESPVQQQQQQQQAAEQVQQSPVVGPRLAPTYTVVNAILEKEEDGPGPRCGHTLTAVAAVGEEGTSGYIGPRLILFGGATALEGNSAAAGTPSSAGNAGIRLAGATADVHCYDVLTNKWSRITPYGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWHKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAIGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTNAASHAAAAAAASNVQAGRLPGPYGFVDDRNRQTMSEATADGSVVLGNPVAPPINGDMYTDISTENAMLQGPRRTSKGVEYLVEASAAEAEAISATLAAAKARQENGEVELPDRDRGAEATPSGKPISSLIRPDSAGPNNIVPGGVRLHHRAVVIAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPTVLQLKAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNSVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPALSSPEASPERHIEDTWMQELNANRPPTPTRGRPQVANDRGSLAWI 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1468g0003 1008 MobiDBLite consensus disorder prediction 1 69 - -
Prci1468g0003 1008 Gene3D - 204 464 IPR015915 GO:0005515
Prci1468g0003 1008 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1008 - -
Prci1468g0003 1008 FunFam Serine/threonine-protein phosphatase 274 474 - -
Prci1468g0003 1008 SUPERFAMILY Metallo-dependent phosphatases 662 967 IPR029052 -
Prci1468g0003 1008 SUPERFAMILY Kelch motif 148 438 IPR015915 GO:0005515
Prci1468g0003 1008 MobiDBLite consensus disorder prediction 1 17 - -
Prci1468g0003 1008 FunFam Serine/threonine-protein phosphatase 73 270 - -
Prci1468g0003 1008 PIRSF STPPP_BSU1 33 1008 IPR012391 GO:0004721|GO:0009742
Prci1468g0003 1008 ProSitePatterns Serine/threonine specific protein phosphatases signature. 774 779 IPR006186 GO:0016787
Prci1468g0003 1008 MobiDBLite consensus disorder prediction 38 69 - -
Prci1468g0003 1008 Pfam Kelch motif 335 381 IPR011498 GO:0005515
Prci1468g0003 1008 Pfam Calcineurin-like phosphoesterase 705 912 IPR004843 GO:0016787
Prci1468g0003 1008 SMART pp2a_7 677 961 IPR006186 GO:0016787
Prci1468g0003 1008 Gene3D - 641 973 IPR029052 -
Prci1468g0003 1008 MobiDBLite consensus disorder prediction 551 585 - -
Prci1468g0003 1008 FunFam Serine/threonine-protein phosphatase 641 981 - -
Prci1468g0003 1008 PRINTS Serine/threonine phosphatase family signature 841 868 IPR006186 GO:0016787
Prci1468g0003 1008 PRINTS Serine/threonine phosphatase family signature 923 939 IPR006186 GO:0016787
Prci1468g0003 1008 PRINTS Serine/threonine phosphatase family signature 740 767 IPR006186 GO:0016787
Prci1468g0003 1008 PRINTS Serine/threonine phosphatase family signature 901 921 IPR006186 GO:0016787
Prci1468g0003 1008 PRINTS Serine/threonine phosphatase family signature 811 837 IPR006186 GO:0016787
Prci1468g0003 1008 PRINTS Serine/threonine phosphatase family signature 705 732 IPR006186 GO:0016787
Prci1468g0003 1008 PRINTS Serine/threonine phosphatase family signature 773 797 IPR006186 GO:0016787
Prci1468g0003 1008 MobiDBLite consensus disorder prediction 553 567 - -
Prci1468g0003 1008 MobiDBLite consensus disorder prediction 984 1008 - -
Prci1468g0003 1008 Gene3D - 75 203 IPR015915 GO:0005515
Prci1468g0003 1008 CDD MPP_Bsu1_C 657 959 IPR041758 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1468g0003 669 904 Calmodulin-binding Proteins AT5G63870 29.044 4.90e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1468g0003 - - zju:107403588 1795.79