LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci1458g0005	ATGAAGGACGGGATTACAAGTGAAGGGTTGATGAATGAGTACAGAGAGGCCATGAATGAAGGGTTTATTCTTGACTGGCAAACTGCTAAGAGTTGTGATGAGTGCGAAGCTTCTGATGGGATTTGTGGTTACAGCAATACCAGAAAGGAGTCCTTGTGCTTCTGCAAAGACGGCAGTGTGCAAAGCAATAGCTGTTCAGGTAGAAGCAAGGCCCGTTTGTCAAAGCCCATAATTGGTCTAATAGTTGGAGGAATTGCAGCTCTGCTGACATGCATCCTTATTGTCTCTTTGAGACGAAAATTGTCATTGATTCTGTCAGCGGAGTTTTGGAAGATGACAAACAATGATCAGCGCATAGAATCCTTCATCAGAAATAATGGACCTCTAACAATAAAAAGATTTACATTTTCAGAAATCAAGAAAATGACCAACTCTTTTGAAGTCAAATTGGGAGAAGGAGGTTATGGTAGAGTATACAAAGGGATTACAATAAAAAATTGCCCAGTGGCCGTGAAGGTATTGAATGCATCCAAAGGGAATGGTGAAGAATTTATCAATGAGGTTGTCAGCATTAGTAGGACTTCACATGTAAATATTGTCACTCTCCTTGGTTTTTGTCTTGAAGGTGGCAAAAAAGCACTTGTGTATGAACTCATGCCAAATGGTTCGCTTGAAAAGTTCATATACAACAGGAAATTGGAGACAAATCCACCCTTGAGTTGGGAAAAATTACTCCAAATTGCTGGAGGGATAGCTAGAGGGCTAGAATACTTGCATAGAGGTTGCAATGCTCGAATCTTGCATTTTGACATAAAACCAAACAATATCCTTTTAGATGAAAATTTTTGCCCAAAAATAGCAGATTTTGGATTAGCTAAGCTTTGCTCAAAAACTCACAGTAAAGTGTCAATGTTGGATGCTAGAGGGACTGTTGGGTATATAGCACCAGAAGTATGGAACCGAAATTTTGGAGGTGTCTCTCACAAGTCAGATGTGTATAGTTATGGAATGTTGATTTTGGAAATGGTTGGAGGAAGAAAGAATGTCAATGAAGAATCAAGTTATTCAAGTGATATATACTTTCCTCATTGGGCATATGGCCAAATTGAGTCAGGCAACAAGATAATAGGGTATGATGATATAACGAGAGAAGAAAGTGAAATTGCAAAGAAGATGATCCTAGTGGGATTATGGTGCATTCAGCCCATGCCATCAGATAGGCCTCCCATGAACAGAGTGATTGAGATGTTGGAAGGGAGCTTGGATCAGCTGTCAATACCACCAAAGCCTTTCATATTTCCACCTACAATTCCAAGAACGGGAGAGGAAAACTTTGCAACAAATGGTGTTCTTTCATTTTCGGCTGATTATCAATGTGGTAGATAG	1386	0.3968	MKDGITSEGLMNEYREAMNEGFILDWQTAKSCDECEASDGICGYSNTRKESLCFCKDGSVQSNSCSGRSKARLSKPIIGLIVGGIAALLTCILIVSLRRKLSLILSAEFWKMTNNDQRIESFIRNNGPLTIKRFTFSEIKKMTNSFEVKLGEGGYGRVYKGITIKNCPVAVKVLNASKGNGEEFINEVVSISRTSHVNIVTLLGFCLEGGKKALVYELMPNGSLEKFIYNRKLETNPPLSWEKLLQIAGGIARGLEYLHRGCNARILHFDIKPNNILLDENFCPKIADFGLAKLCSKTHSKVSMLDARGTVGYIAPEVWNRNFGGVSHKSDVYSYGMLILEMVGGRKNVNEESSYSSDIYFPHWAYGQIESGNKIIGYDDITREESEIAKKMILVGLWCIQPMPSDRPPMNRVIEMLEGSLDQLSIPPKPFIFPPTIPRTGEENFATNGVLSFSADYQCGR	461

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci1458g0005	461	Pfam	Protein kinase domain	147	414	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci1458g0005	461	SMART	serkin_6	144	417	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci1458g0005	461	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	266	278	IPR008271	GO:0004672\|GO:0006468
	Prci1458g0005	461	Gene3D	Phosphorylase Kinase; domain 1	119	218	-	-
	Prci1458g0005	461	FunFam	PR5-like receptor kinase	219	429	-	-
	Prci1458g0005	461	SUPERFAMILY	Protein kinase-like (PK-like)	122	418	IPR011009	-
	Prci1458g0005	461	ProSiteProfiles	Protein kinase domain profile.	144	432	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci1458g0005	461	Pfam	Wall-associated receptor kinase C-terminal	9	58	IPR032872	-
	Prci1458g0005	461	Gene3D	Transferase(Phosphotransferase) domain 1	219	426	-	-
	Prci1458g0005	461	ProSitePatterns	Protein kinases ATP-binding region signature.	150	172	IPR017441	GO:0005524
	Prci1458g0005	461	PANTHER	RUST RESISTANCE KINASE LR10-RELATED	115	437	IPR045874	GO:0004672

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci1458g0005	15	444	Receptor kinase-like Gene Family	AT5G38260	47.500	4.49e-130	389

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRK10L-2	Prci1458g0005		Pkinase	3.7e-45	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci1458g0005	-		-	gmx:100781977	615.535