LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci1458g0003	ATGCTGAAACTCGCATGTTTTCTTCTCCCTCTGTTTTCCTTCTTCAACCGTAGTGCTTCTGCTAGCAACTCCACTTCATCCTCCACAGTTTGTCCCACCTACAACTGTGCCGATGGGCTCAAAATCAGTTCTCACCCCTCTGATGCGTCGCCCATAACGTGTTTGACATCTGGTGTGAAGCAGTCCTTTGTGTTTGTGACGGGGAACGAAACTGAGGGTTTTGATTGGTCCAATACTTGTGAAGAGAGTGTTGTCGTGACGGTGATGAAGGACGGGATTACAAGTGAAGGGTTGATGAATGAGTACAGAGAGGCCATGAATGAAGGGTTTATTCTTGACTGGCAAACTGCTAAGAGTTGTGATGAGTGCGAAGCTTCTGATGGGATTTGTGGTTACAGCAATACCAGAAAGGAGTCCTTGTGCTTCTGCAAAGACGGCAGTGTGCAAAGCAATAGCTGTTCAGGTAGAAGCAAGGCCCGTTTGTCAAAGCCCATAATTGGTCTAATAGTTGGAGGAATTGCAGCTCTGCTGACATGCATCCTTATTGTCTCTTTGAGACGAAAATTGTCATTGATTCTGTCAGCGGAGTTTTGGAAGATGACAAACAATGATCAGCGCATAGAATCCTTCATCAGAAATAATGGACCTCTAACAATAAAAAGATTTACATTTTCAGAAATCAAGAAAATGACCAACTCTTTTGAAGTCAAATTGGGAGAAGGAGGTTATGGTAGAGTATACAAAGGGATTACAATAAAAAATTGCCCAGTGGCCGTGAAGGTATTGAATGCATCCAAAGGGAATGGTGAAGAATTTATCAATGAGGTTGTCAGCATTAGTAGGACTTCACATGTAAATATTGTCACTCTCCTTGGTTTTTGTCTTGAAGGTGGCAAAAAAGCACTTGTGTATGAACTCATGCCAAATGGTTCGCTTGAAAAGTTCATATACAACAGGAAATTGGAGACAAATCCACCCTTGAGTTGGGAAAAATTACTCCAAATTGCTGGAGGGATAGCTAGAGGGCTAGAATACTTGCATAGAGGTTGCAATGCTCGAATCTTGCATTTTGACATAAAACCAAACAATATCCTTTTAGATGAAAATTTTTGCCCAAAAATAGCAGATTTTGGATTAGCTAAGCTTTGCTCAAAAACTCACAGTAAAGTGTCAATGTTGGATGCTAGAGGGACTGTTGGGTATATAGCACCAGAAGTATGGAACCGAAATTTTGGAGGTGTCTCTCACAAGTCAGATGTGTATAGTTATGGAATGTTGATTTTGGAAATGGTTGGAGGAAGAAAGAATGTCAATGAAGAATCAAGTTATTCAAGTGATATATACTTTCCTCATTGGGCATATGGCCAAATTGAGTCAGGCAACAAGATAATAGGGTATGATGATATAACGAGAGAAGAAAGTGAAATTGCAAAGAAGATGATCCTAGTGGGATTATGGTGCATTCAGCCCATGCCATCAGATAGGCCTCCCATGAACAGAGTGATTGAGATGTTGGAAGGGAGCTTGGATCAGCTGTCAATACCACCAAAGCCTTTCATATTTCCACCTACAATTCCAAGAACGGGAGAGGAAAACTTTGCAACAAATGGTGTTCTTTCATTTTCGGCTGATTATCAATGTGGTAGATAG	1650	0.4109	MLKLACFLLPLFSFFNRSASASNSTSSSTVCPTYNCADGLKISSHPSDASPITCLTSGVKQSFVFVTGNETEGFDWSNTCEESVVVTVMKDGITSEGLMNEYREAMNEGFILDWQTAKSCDECEASDGICGYSNTRKESLCFCKDGSVQSNSCSGRSKARLSKPIIGLIVGGIAALLTCILIVSLRRKLSLILSAEFWKMTNNDQRIESFIRNNGPLTIKRFTFSEIKKMTNSFEVKLGEGGYGRVYKGITIKNCPVAVKVLNASKGNGEEFINEVVSISRTSHVNIVTLLGFCLEGGKKALVYELMPNGSLEKFIYNRKLETNPPLSWEKLLQIAGGIARGLEYLHRGCNARILHFDIKPNNILLDENFCPKIADFGLAKLCSKTHSKVSMLDARGTVGYIAPEVWNRNFGGVSHKSDVYSYGMLILEMVGGRKNVNEESSYSSDIYFPHWAYGQIESGNKIIGYDDITREESEIAKKMILVGLWCIQPMPSDRPPMNRVIEMLEGSLDQLSIPPKPFIFPPTIPRTGEENFATNGVLSFSADYQCGR	549

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci1458g0003	549	SMART	serkin_6	232	505	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci1458g0003	549	FunFam	PR5-like receptor kinase	307	517	-	-
	Prci1458g0003	549	SUPERFAMILY	Protein kinase-like (PK-like)	210	506	IPR011009	-
	Prci1458g0003	549	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	354	366	IPR008271	GO:0004672\|GO:0006468
	Prci1458g0003	549	Gene3D	Phosphorylase Kinase; domain 1	207	306	-	-
	Prci1458g0003	549	ProSiteProfiles	Protein kinase domain profile.	232	520	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci1458g0003	549	Pfam	Protein kinase domain	235	502	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci1458g0003	549	ProSitePatterns	Protein kinases ATP-binding region signature.	238	260	IPR017441	GO:0005524
	Prci1458g0003	549	PANTHER	RUST RESISTANCE KINASE LR10-RELATED	199	525	IPR045874	GO:0004672
	Prci1458g0003	549	Gene3D	Transferase(Phosphotransferase) domain 1	307	514	-	-
	Prci1458g0003	549	Pfam	Wall-associated receptor kinase C-terminal	59	146	IPR032872	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci1458g0003	77	532	Receptor kinase-like Gene Family	AT5G38260	45.629	1.23e-130	393

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRK10L-2	Prci1458g0003		Pkinase	5.9e-45	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci1458g0003	-		-	gmx:100781977	662.529