Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1439g0001 ATGGAGAGCACCGACTCGTCCACAGGTTCCCAGCAACCGAACCTGCCGCCCGGGTTCCGGTTCCATCCCACCGACGAGGAGCTTGTCGTTCACTACCTCAAGAAGAAGGTCTCCTCCGCTCCCCTCCCCGTCGCCATCATCGCCGAGGTCGACCTATACAAGTTCGACCCCTGGGAACTTCCTGCTAAGGCAGTGTTTGGGGAGCAAGAGTGGTATTTCTTCAGCCCGAGGGACAGGAAGTACCCGAACGGAGCGAGGCCAAACAGGGCAGCCACGTCTGGGTATTGGAAGGCGACGGGGACCGATAAGCCCGTGCTCACAGCTAATGGAAACCAGAAGGTAGGGGTGAAAAAAGCTCTGGTCTTCTACGGAGGGAAACCCCCGAGAGGGATCAAAACCAATTGGATCATGCACGAGTATCGCCTCGTCGATAACAAGCCTAACAACAAGCCTCCTGGGTGTGACTTAGGCAGCAAGAAAAACTCTCTACGGCTGGACGACTGGGTACTGTGCCGAATCTATAAGAAGACCAACACACAGAGATCACCCATGGATCATGAAAGGGACGATTCAATGGATGATATGATTGGAGCTGGAGGGGTGCCTTCGTCAATCAACGTGGGCCAAATGAATGCGAGATTTCATCTTTCCAAGATGTCCACATTAAGCTACGGTGGAACCGCATTGCTGGAGAATCATCATGACCAGAACTTGCTGGAAGGGGTTGTACTGAGCAGCAACCATAACAAGGAACCAGATCTTCAACTTCCCTTTGTGACAACCATGACTACCACGACTGCCTCTAACTCAAACGCGAAACGAACGCTGTCTTCTCTGTACTGGAGCAATAATAACGAAGAGGAGGATGTGAACGGCACAAAAAGGTTGGGTTTGGATGAGAATCTTCATCATCATAATAACAACAACGAGGGTGGCAGTAATTCCATAGCCACCTTGCTTAACCAGCTTCCTCAGACTCCTTCATTGCACCACCAAACAACGCTTAGCTCCTACCCATATTCGATACCTGGAATGAATTGGTATACTTGA 1050 0.5105 MESTDSSTGSQQPNLPPGFRFHPTDEELVVHYLKKKVSSAPLPVAIIAEVDLYKFDPWELPAKAVFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTANGNQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLVDNKPNNKPPGCDLGSKKNSLRLDDWVLCRIYKKTNTQRSPMDHERDDSMDDMIGAGGVPSSINVGQMNARFHLSKMSTLSYGGTALLENHHDQNLLEGVVLSSNHNKEPDLQLPFVTTMTTTTASNSNAKRTLSSLYWSNNNEEEDVNGTKRLGLDENLHHHNNNNEGGSNSIATLLNQLPQTPSLHHQTTLSSYPYSIPGMNWYT 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1439g0001 349 MobiDBLite consensus disorder prediction 1 20 - -
Prci1439g0001 349 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Prci1439g0001 349 MobiDBLite consensus disorder prediction 1 17 - -
Prci1439g0001 349 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
Prci1439g0001 349 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Prci1439g0001 349 FunFam NAC transcription factor 56 24 181 - -
Prci1439g0001 349 PANTHER NAC TRANSCRIPTION FACTOR 56 15 191 - -
Prci1439g0001 349 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1439g0001 1 349 NAC Transcription Factor Family AT3G15510 51.064 4.56e-121 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci1439g0001 NAM 6.4e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1439g0001 - - gmx:100784578 497.664