Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1437g0001 ATGGAGAGTCTGTTGAAGGACTTCGTTGTGGAGCACAAGAGACCATCCATCGAAGCCTCGATGCGATGGAGATCAGCCGTCGCGTTAGTAAAGAACCACCGCAGACGTTTCCGCATGGTGGCAGATCTCCAGAAACGTTCCGAAGCCGAAAAAAAGAAAGAAGGAATCAATCAGGATAAAGTTCGAGTTGCTCTCTTTGTTCAAAAGGCAGCACTGCACTTTATTAATGCTCGTGGTCTAGCTGAAAACAATCTACCAGAAGACGGGAGAGAAGCTGGTTTCAGCATTGATATCAGTGAGATTGCGTCTATTGTTCGGGGCCACGATTATGAAGCATTAGAAAAATACGGTGGGGTTAAAGAAATTGCAACGAAACTCTCTACCTCTGTAGATGAAGGTATTAACGAAGATACTGTAAAAACAAGGCAACAAGTTTATGGGATCAACCGTTATACAGAAAGACCTCCCAGGACCTTCCTGATGTTCGTGTGGGAAGCACTACATGATTTGACCCTAATTATTCTCATGGTTTGTGCCGTAGTGTCTATAGGTGTAGGTATTGCCACTGAACGGTGGCCTGAGGGTATGTATGATGGTTTAGGAATCATACTCAGTGTGCTCTTGGTAGTTACTGTGACTGCTGCAAGTGACTACCAACAATCCTTACAGTTCAGGGCTTTAGACAAGGAGAAGAAAAAAATCTCTGTCCATGTCATTAGGGATGGGAAAAGGCAAAAGATTTCAATTTATGACGTGGTAGTGGGAGATATTGTTTATTTGTCAACTGGGGATCAAGTTCCAGCTGATGGCGTTTACATATCAGGATACAACTTGTTGATTGATGAATCAAGCTTGTCAGGTGAGAGTGAACCAGTAAATTTGCTTGAAGAAAAACCATTTCTTCTGTCAGGAACTAAAGTACAAGATGGTCAAGGGAAAATGTTAGTGACAACTGTTGGCATGCGGACTGAATGGGGAAAACTAATGGAAACTTTAAACGAGGGGGGAGAGGATGAGACCCCCTTGCAAGTCAAACTGAATGGAGTTGCTACAATAATTGGCAAGATTGGTTTGACTTTCGCTGTGCTGACATTTTTGGTGCTGACGATAAGGTTTGTGGTGGAAAAGGCAATTCATGGTGATATTACTCATTGGTCGTCAAATGATGCAGTAAAGCTGCTAAACTATTTTGCTATTTCTGTTACGATAATAGTTGTTGCCGTTCCAGAGGGACTACCTTTGGCAGTGACACTTAGCCTTGCTTTTGCAATGAAAGAACTGATGAATGAAAGAGCACTCATGAGGCATCTTTCTGCGTGCGAGACAATGGGTTCAGCGAGTTGCATATGTACAGATAAGACAGGGACGTTAACCGCTAACCATATGGCGGTTGATAAAATATGGATATGCGAGAAAACCATGGAAATTAAAGGCAATGAAAGTGGAGCCAAGCTAAGAACAGAGATATCTGAAGGAGCTCTGGACGTCCTTTTGCAGGCTATGTTTCAAAATACTTCTTCTGAAGTAGTCAAGGATAGAGATGGAAAGAACTCAATACTTGGAACACCAACAGAATCGGCATTATTGGAATTTGGCTTGCTTTTGGGTGGTGATTTGGATTCCCAGCACAGAGATTATAAGAAACTTGACATTGAGCCTTTTAATTCAGTTCGAAAGAAGATGTCTGTTCTCGTAGGTCTCCCTGAAGGGGGGATACGAGCTTTCTGCAAAGGTGCATCAGAAATAATATTGAAAATGTGTGACAAATTTATTGATTGCAATGGAGAAACCATTGATCTTCTTGAAGACCAAGCGAAGAATATTTCTGATGTTATAAACAATTTTGCCTCGGGAGCTTTAAGAACTCTTTGTTTGGCTGTCAGAGATATAAATGAAAACCAAGGGAAAATAAGTATACCTGATGATGGCTACACACTAATAGCCGTTTTAGGAATCAAGGATCCTGTGCGCCCTGAGGTCAAGAACGCCGTTCAAACTTGTTTAGCAGCTGGAATAACAGTTCGTATGGTCACTGGTGATAACATACATACAGCTGAGGCTATAGCTGAAGAATGTGGCATCCTCACCGAGGATGGTATAGCAATAGAAGGACCAGAATTTCGCAACTTGTCACCTGAACAAATAAAGCATTTGATACCAAGAATCCAGGTCCTGGCGCGATCTTTGCCGCTTGATAAGCATACCTTGGTATCCCATTTGAGGAATACGTTTGGTGAAGTTGTTGCTGTTACTGGAGACGGAACCAATGATGCTCCGGCATTGCATGAAGCAGATATTGGATTTGCCATGGGCATCGCTGGAACAGAGGTTGCCAAACAAAATGCAGATGTGATCATAATGGATGATAACTTCAAGACAATTGTGAAAGTGGCCAGGTGGGGGCGGGCAGTATACATAAACATTCAAAAATTTGTGCAGTTTCAGTTAACGGTAAATGCTGTTGCTCTTGTGATCAACTTTGTTTCTGCGTGCATCACAGGATCTACTCCACTAACGGCTATACAATTACTATGGGTGAACTTGATTATGGACACTCTGGGGGCTCTAGCCCTAGCCACTGAGCCTCCTCATGATGAGCTAATGAAAAGACCCCCAGTTGCAAAAGGGGCAAGCTTTATCACCAAACCCATGTGGAGGAATATCATTGGACAAAGTATATATCAGTTAATTGTCCTTGCCATTCTCAATTTTGCGGGCAAGAGGCTTCTCAGAATTACCGGTTCAGGTGCAACTATTGTTCTCAACACTTTGATCTTCAACTCCTTTGTATTTTGCCAGGTGTTCAATGAGATAAACAGCCGAGACATAAATAAGATAAACGTATTCAGAGGCATGTTTAAGAGCTGGATATTTTTAGGGATAATTTTCATAACAGTGGCATTTCAAGTAATCATAGTTGAGTTTCTGGGGACATTTGCTAGCACAGCGCCTCTCAACTGGAAACTCTGGCTATTCAGTATCGTGATTGGAGCAATGAGCATGCCAGTATCTGCTATTGTCAAGTGCATTCCAGTTGAAAGAGATGCGATATTCCAACACCATGATGGTTACGAGGAATTGCCTTCGGACCCCGATCAGCTAGCATAA 3108 0.4241 MESLLKDFVVEHKRPSIEASMRWRSAVALVKNHRRRFRMVADLQKRSEAEKKKEGINQDKVRVALFVQKAALHFINARGLAENNLPEDGREAGFSIDISEIASIVRGHDYEALEKYGGVKEIATKLSTSVDEGINEDTVKTRQQVYGINRYTERPPRTFLMFVWEALHDLTLIILMVCAVVSIGVGIATERWPEGMYDGLGIILSVLLVVTVTAASDYQQSLQFRALDKEKKKISVHVIRDGKRQKISIYDVVVGDIVYLSTGDQVPADGVYISGYNLLIDESSLSGESEPVNLLEEKPFLLSGTKVQDGQGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIGLTFAVLTFLVLTIRFVVEKAIHGDITHWSSNDAVKLLNYFAISVTIIVVAVPEGLPLAVTLSLAFAMKELMNERALMRHLSACETMGSASCICTDKTGTLTANHMAVDKIWICEKTMEIKGNESGAKLRTEISEGALDVLLQAMFQNTSSEVVKDRDGKNSILGTPTESALLEFGLLLGGDLDSQHRDYKKLDIEPFNSVRKKMSVLVGLPEGGIRAFCKGASEIILKMCDKFIDCNGETIDLLEDQAKNISDVINNFASGALRTLCLAVRDINENQGKISIPDDGYTLIAVLGIKDPVRPEVKNAVQTCLAAGITVRMVTGDNIHTAEAIAEECGILTEDGIAIEGPEFRNLSPEQIKHLIPRIQVLARSLPLDKHTLVSHLRNTFGEVVAVTGDGTNDAPALHEADIGFAMGIAGTEVAKQNADVIIMDDNFKTIVKVARWGRAVYINIQKFVQFQLTVNAVALVINFVSACITGSTPLTAIQLLWVNLIMDTLGALALATEPPHDELMKRPPVAKGASFITKPMWRNIIGQSIYQLIVLAILNFAGKRLLRITGSGATIVLNTLIFNSFVFCQVFNEINSRDINKINVFRGMFKSWIFLGIIFITVAFQVIIVEFLGTFASTAPLNWKLWLFSIVIGAMSMPVSAIVKCIPVERDAIFQHHDGYEELPSDPDQLA 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1437g0001 1035 FunFam Calcium-transporting ATPase 648 796 - -
Prci1437g0001 1035 Gene3D - 133 333 - -
Prci1437g0001 1035 NCBIfam calcium-translocating P-type ATPase, PMCA-type 110 1013 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Prci1437g0001 1035 FunFam Calcium-transporting ATPase 768 1014 - -
Prci1437g0001 1035 PRINTS H+-transporting ATPase (proton pump) signature 751 767 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci1437g0001 1035 PRINTS H+-transporting ATPase (proton pump) signature 783 808 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci1437g0001 1035 PRINTS H+-transporting ATPase (proton pump) signature 608 626 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci1437g0001 1035 SFLD C1.7: P-type atpase like 432 803 - -
Prci1437g0001 1035 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 456 660 IPR023299 GO:0000166
Prci1437g0001 1035 SUPERFAMILY HAD-like 449 856 IPR036412 -
Prci1437g0001 1035 Pfam E1-E2 ATPase 233 429 - -
Prci1437g0001 1035 SMART Cation_ATPase_N_a_2 109 187 IPR004014 -
Prci1437g0001 1035 Gene3D - 15 76 - -
Prci1437g0001 1035 NCBIfam HAD-IC family P-type ATPase 202 372 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci1437g0001 1035 NCBIfam HAD-IC family P-type ATPase 721 839 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci1437g0001 1035 NCBIfam HAD-IC family P-type ATPase 388 472 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci1437g0001 1035 NCBIfam HAD-IC family P-type ATPase 547 696 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci1437g0001 1035 Pfam Cation transport ATPase (P-type) 507 589 - -
Prci1437g0001 1035 PANTHER CATION TRANSPORTING ATPASE 76 1012 - -
Prci1437g0001 1035 Pfam Cation transporter/ATPase, N-terminus 116 182 IPR004014 -
Prci1437g0001 1035 Gene3D - 460 655 IPR023299 GO:0000166
Prci1437g0001 1035 Pfam Cation transporting ATPase, C-terminus 836 1009 IPR006068 -
Prci1437g0001 1035 SFLD p-type atpase 432 803 IPR044492 -
Prci1437g0001 1035 ProSitePatterns E1-E2 ATPases phosphorylation site. 452 458 IPR018303 -
Prci1437g0001 1035 FunFam Calcium-transporting ATPase 213 333 - -
Prci1437g0001 1035 FunFam Calcium-transporting ATPase 460 655 - -
Prci1437g0001 1035 Gene3D - 165 1010 - -
Prci1437g0001 1035 Gene3D - 447 796 IPR023214 -
Prci1437g0001 1035 PRINTS P-type cation-transporting ATPase superfamily signature 670 680 - -
Prci1437g0001 1035 PRINTS P-type cation-transporting ATPase superfamily signature 450 464 - -
Prci1437g0001 1035 PRINTS P-type cation-transporting ATPase superfamily signature 775 787 - -
Prci1437g0001 1035 PRINTS P-type cation-transporting ATPase superfamily signature 751 770 - -
Prci1437g0001 1035 PRINTS P-type cation-transporting ATPase superfamily signature 648 659 - -
Prci1437g0001 1035 PRINTS P-type cation-transporting ATPase superfamily signature 281 295 - -
Prci1437g0001 1035 CDD P-type_ATPase_Ca_PMCA-like 142 884 - -
Prci1437g0001 1035 SUPERFAMILY Calcium ATPase, transduction domain A 235 331 IPR008250 -
Prci1437g0001 1035 SUPERFAMILY Calcium ATPase, transmembrane domain M 116 1012 IPR023298 -
Prci1437g0001 1035 Pfam Ca2+-ATPase N terminal autoinhibitory domain 6 48 IPR024750 GO:0005516
Prci1437g0001 1035 FunFam Calcium-transporting ATPase 15 76 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1437g0001 59 1035 Primary Pumps ATPases AT3G57330 69.601 0.0 1406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1437g0001 K01537 - gmx:100798481 1571.99