LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci1436g0002	ATGGGGAGGAAGGGAAATTGGTTTTCCAATGTGAAGAAGGCTTTCAGCCCCGAGTCAAAGAAGAAGGAAGATCAGAAAGCAAGCAAATCGAAGAAGAAATGGTTTGGGAAGCAAAAATTGGAGGCCACCTCAGACTCACACTTGGGTTCTGAGAAAACAGCACGTCCTTCTCCTCATCCTGAAGAAATTAAGTCACATGATGTTGAGAATGAATCCAGTCAAAGTCATGTTCATGCAGTTGCAACTACTGTGAATGCTGAGAGACCTATTCCTGCGGCTCAGACAGCAGCTGTTGCAGTTCAAGCCCCTAAAATCCCTCGATTTGCCGGTAAATCAAGGGAAGAAGTGGCTACACTAAAGATTCAGACAGCTTTTAGGGGATATCTGGCAAGAAGAGCATTGCGAGCTTTGAGAGGGCTGGTCAGATTGAGGACACTAATGGAAGGGCCAATTGTAAAACGCCAAGCTACTAGCACTCTTCGTTCTATGCAAACTTTAGCTCGTGTGCAATCTCAGATTCGTTCTAGGAGGATCAGGATGTTCGAGGAGAATCAGGCTCTACAAAGGCAGCTCTTACACAAGCATGCAAAAGAGCTCGAGAGCATGCGGATTGGAGAGGAATGGGATGATAGCCTGCAATCCAAAGAACAAATTGAAGCAAAGTTGCTACAGAAGTATGAGGCAGCTATGAGAAGAGAAAAGGCGCTGGCTTACGCATTCACTCATCAGCAAACATGGAAGAATTCATACAGATCTATAAACCCAATGTTCATGGATCCAACTAATCCTTCCTGGGGTTGGAGCTGGCTGGAACGATGGATGGCTGCCCGGACATGGGAGAGCCAAAGCAAAATGGAGAAAGAAATGAACGATGACCATTCATCAGTGAGAAGTTCTAGCCGCAGCATCACCGGTGGAGAAATCAGCAAATCATATGCTCGTTACCAGCTCAATTCTGAAAAGCATTCTCCCACAGCAAGCCAAATTCCTGACTCCCCTAGCTTCCGTTTATATTCAACTCCTTCAAAGCCAGCTTCCAGAAAACTGAAGAAGGCCAGCCCAAAGGACAGCTTTGCAATGGATGATGACATTAAAAGTGTGGCCAGTGCGCAGTCAGGGCGGTTCCGGAGGCACTCCATCGGTGGCGCGTCCGTGAGAGACGACGAGAGCCTTGCGAGCTCTCCGGCGGTTCCGAGTTACATGGTGGCAACTCAGTCTGCAAAAGCCAAGTCCAGGACGCAGAGTCCATTGGCAGCTGAGAATGGCACGCCGCAGAAGGCGAAAGATAAAGGATCTTTCGGGACTGCAAAGAAACGGCTTTCTTACCCGCCTTCACCGGCGAGGCCGTGGCGGCATTCAAGTGGGCCCCCAAAGGTAGAAAACAACTTAACTGCAGAAATCACTATGGCTGATGGCGGGGCTGCTTAA	1428	0.486	MGRKGNWFSNVKKAFSPESKKKEDQKASKSKKKWFGKQKLEATSDSHLGSEKTARPSPHPEEIKSHDVENESSQSHVHAVATTVNAERPIPAAQTAAVAVQAPKIPRFAGKSREEVATLKIQTAFRGYLARRALRALRGLVRLRTLMEGPIVKRQATSTLRSMQTLARVQSQIRSRRIRMFEENQALQRQLLHKHAKELESMRIGEEWDDSLQSKEQIEAKLLQKYEAAMRREKALAYAFTHQQTWKNSYRSINPMFMDPTNPSWGWSWLERWMAARTWESQSKMEKEMNDDHSSVRSSSRSITGGEISKSYARYQLNSEKHSPTASQIPDSPSFRLYSTPSKPASRKLKKASPKDSFAMDDDIKSVASAQSGRFRRHSIGGASVRDDESLASSPAVPSYMVATQSAKAKSRTQSPLAAENGTPQKAKDKGSFGTAKKRLSYPPSPARPWRHSSGPPKVENNLTAEITMADGGAA	475

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci1436g0002	475	MobiDBLite	consensus disorder prediction	401	475	-	-
	Prci1436g0002	475	PANTHER	IQ-DOMAIN 5-RELATED	1	445	-	-
	Prci1436g0002	475	MobiDBLite	consensus disorder prediction	284	304	-	-
	Prci1436g0002	475	MobiDBLite	consensus disorder prediction	318	341	-	-
	Prci1436g0002	475	MobiDBLite	consensus disorder prediction	15	73	-	-
	Prci1436g0002	475	SMART	iq_5	113	135	IPR000048	GO:0005515
	Prci1436g0002	475	MobiDBLite	consensus disorder prediction	401	421	-	-
	Prci1436g0002	475	MobiDBLite	consensus disorder prediction	318	358	-	-
	Prci1436g0002	475	MobiDBLite	consensus disorder prediction	1	77	-	-
	Prci1436g0002	475	ProSiteProfiles	IQ motif profile.	114	142	IPR000048	GO:0005515
	Prci1436g0002	475	Pfam	IQ calmodulin-binding motif	117	135	IPR000048	GO:0005515
	Prci1436g0002	475	Pfam	Protein of unknown function (DUF4005)	391	455	IPR025064	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci1436g0002	1	475	IQD Protein Family	AT5G03040	49.287	5.27e-141	411

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci1436g0002	-		-	gmx:100800080	606.29