Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1420g0003 ATGGTCAAGAGAGGGCACAAGATCCACGCAGAGACATCAAAGCCAATGCAAGCTCAGACATCGTCAGCATCATCAGATGGGAAGAAGAGGTACAAGGGAGTGAGAATGAGGAGCTGGGGATCATGGGTTTCAGAGATTAGAGCACCGAACCAGAAAACAAGAATATGGTTGGGATCTTATTCAACCCCGGAGGCTGCAGCCCGAGCCTACGATGCTGCACTTCTATGCCTCAAGGGTTCGTCAGCTAATCTCAACTTCCCTTCAAGTTCTTCACAATACATTCCTCAAGACAATGTCATGTCTCCTAAATCAATCCAAAGAGTTGCTGCAGCTGCTGCAAATAGTTTTTCTGACAATGCCACAACCCCACCTTCTCCGCCCCCTGCCTCCGCCTCGACCTCCTCATCCTCACTCGTCTCGTCCCCATCAATGTCCTCCGATCAAATCGATGATGATGTCTCACTAATCTCATCATTTGGGGCCTACGCTAGTTATGATCAGACTAATGAACCAGTCTCTTTGATGGACTCTTGGTATAGCTTTGATGATTTGCAATCTCCCAAGTATGTGAATCAAATGCTCGGTGGTAATTTGTTTGATATTGATCCAACCCAGCTGCTCGATGATTTTTGCGAGGAAAGTGATATTCGTTTGTGGAGCTTCTGCTGA 669 0.4694 MVKRGHKIHAETSKPMQAQTSSASSDGKKRYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALLCLKGSSANLNFPSSSSQYIPQDNVMSPKSIQRVAAAAANSFSDNATTPPSPPPASASTSSSSLVSSPSMSSDQIDDDVSLISSFGAYASYDQTNEPVSLMDSWYSFDDLQSPKYVNQMLGGNLFDIDPTQLLDDFCEESDIRLWSFC 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1420g0003 222 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 13 164 - -
Prci1420g0003 222 CDD AP2 29 89 IPR001471 GO:0003700|GO:0006355
Prci1420g0003 222 MobiDBLite consensus disorder prediction 13 27 - -
Prci1420g0003 222 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
Prci1420g0003 222 MobiDBLite consensus disorder prediction 1 32 - -
Prci1420g0003 222 FunFam ethylene-responsive transcription factor ERF014-like 29 89 - -
Prci1420g0003 222 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
Prci1420g0003 222 MobiDBLite consensus disorder prediction 112 147 - -
Prci1420g0003 222 Gene3D AP2/ERF domain 29 88 IPR036955 GO:0003700|GO:0006355
Prci1420g0003 222 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Prci1420g0003 222 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700|GO:0006355
Prci1420g0003 222 Pfam AP2 domain 30 79 IPR001471 GO:0003700|GO:0006355
Prci1420g0003 222 SUPERFAMILY DNA-binding domain 30 88 IPR016177 GO:0003677
Prci1420g0003 222 MobiDBLite consensus disorder prediction 131 147 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1420g0003 31 221 AP2-EREBP Transcription Factor Family AT1G21910 54.187 1.09e-50 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci1420g0003 AP2 5.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1420g0003 - - qsa:O6P43_015204 287.73