Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1414g0002 ATGGATGTTGAGGAAGCAGAAAGGGTGGTTGTTGCCAAACCAGTAGCTTCAAGGCCTACTTGCCCCCCTTTTAGATCCTTCTCCGAGCTACTTGCAGGTGCCATCAATGCCTCTCCATCTATTGAATCTTCTCAAGCCACAGTTTCAGCCATTAGACCAAAGACTGTGAGGTTCAAGCCAGCCGTGAATCGCCCACCTCCTGCTGGGTTTATTTCTTCTGAGGCTAACCCATCTTACAAAAATCATAGACCAGACACTAATCAAACAGTTGTTTACAAGCCTACGGCTAAGCTTGTCTCCAAGGCCACTGTTTCTCTTTTGGCAAATATGGGAAACTATAGTACCAGTCATAGCCAGCAGTTTCAACTTCCCAATCCGGAGAAACTGAGGACAAATTTGAGCTCAATTCATCACCAGAATAATAACACCCCAAGCGCTGAATCAAATCAAGCAATTGTATGTCACAAGATGGTACAACAGAGCCCAGAGGAGGACCAGAAAACTTCACCATCTACTAGTAATTGTGGTGATAGACCTTGTTATGATGGGTATAACTGGAGGAAATATGGCCAGAAGCAAGTGAAAGGAAGCGAGTATCCAAGGAGTTATTACAAATGCACGCATCCTAATTGCCCAGTGAAGAAGAAGGTTGAAAGATCATTTGATGGGCAGATTGCAGAAATTGTGTATAAAGGGGAGCACAACCATTCAAAGCCCCAGCCTCCTAAGCGCAACTCATTAGGGACACAAGGATCAGGAATCGTGCCTGATGGATTGGGTGAAGATACTAATTGTAATAACCATTTATGGGTTAATCCTAGCGGTGAGAGGAATGAAAATAGAATAGAGAACCAGAGTGACGCTGGTTATCTTGTCAAAGTTGGAGGGAGCCCTGAGAATTCACATGTTCAAAGTGAGGAATGTGAGGAAGGAAGCAAGGGAAATGAAGTGGAGGTAGATGAACCCAAAAGTAAAAGAAGGAAAAACGAGAATCAATCCCATGAAGTAGTAGCAGTAGCAGAGGAAGGTTTAGTGGAGCCTCAAGTGGTGGTTCAGAGTTCTACAGATTCTGATGTGCTTGGAGACGGCTTTCGCTGGAGGAAATATGGACAGAAGGTTGTGAAGGGCAATCCATATCCCAGAAGTTATTATAGATGCACTAACATAAAGTGCAGCGCCCGGAAACATGTGGAAAGATCAATAGATGACCCAAAAGCATTTATCACTACTTACGAGGGGAAACACAACCATGAGATGCCACGCAAAGCTATAGGTGCTGTGGCTTCTGAGAAAGTCAAGCAATGA 1305 0.4421 MDVEEAERVVVAKPVASRPTCPPFRSFSELLAGAINASPSIESSQATVSAIRPKTVRFKPAVNRPPPAGFISSEANPSYKNHRPDTNQTVVYKPTAKLVSKATVSLLANMGNYSTSHSQQFQLPNPEKLRTNLSSIHHQNNNTPSAESNQAIVCHKMVQQSPEEDQKTSPSTSNCGDRPCYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSFDGQIAEIVYKGEHNHSKPQPPKRNSLGTQGSGIVPDGLGEDTNCNNHLWVNPSGERNENRIENQSDAGYLVKVGGSPENSHVQSEECEEGSKGNEVEVDEPKSKRRKNENQSHEVVAVAEEGLVEPQVVVQSSTDSDVLGDGFRWRKYGQKVVKGNPYPRSYYRCTNIKCSARKHVERSIDDPKAFITTYEGKHNHEMPRKAIGAVASEKVKQ 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1414g0002 434 MobiDBLite consensus disorder prediction 231 334 - -
Prci1414g0002 434 ProSiteProfiles WRKY domain profile. 182 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci1414g0002 434 SMART WRKY_cls 180 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci1414g0002 434 SMART WRKY_cls 360 419 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci1414g0002 434 MobiDBLite consensus disorder prediction 303 334 - -
Prci1414g0002 434 Pfam WRKY DNA -binding domain 182 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci1414g0002 434 Pfam WRKY DNA -binding domain 362 418 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci1414g0002 434 SUPERFAMILY WRKY DNA-binding domain 179 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci1414g0002 434 SUPERFAMILY WRKY DNA-binding domain 354 420 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci1414g0002 434 MobiDBLite consensus disorder prediction 59 86 - -
Prci1414g0002 434 MobiDBLite consensus disorder prediction 265 279 - -
Prci1414g0002 434 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 119 422 IPR044810 GO:0003700
Prci1414g0002 434 FunFam WRKY transcription factor 57 346 420 - -
Prci1414g0002 434 Gene3D WRKY domain 345 421 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci1414g0002 434 Gene3D WRKY domain 165 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci1414g0002 434 ProSiteProfiles WRKY domain profile. 355 420 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci1414g0002 434 FunFam WRKY transcription factor 165 240 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1414g0002 362 429 WRKY Transcription Factor Family AT2G37260 49.315 2.66e-15 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci1414g0002 WRKY 1.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1414g0002 - - gmx:100794069 548.125