Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci140g0015 ATGAACTTTCTTGACCCTCATGATCCAAACTATGACAGCACTGAGGAAAATGAACCTTCGAATGAAAAGAAAAAGAAAGGGGAGTTAGATGAGTACAAGAAGAAAGCTACAATAATAGTGGAGGAATATTTCACCACCGATGATATTGTTGCTGTAAAAAACGAACTGAGAGAACTTGGAACGCCATACTTCAGCTACTATTTTGTCAAGAAGCTTGTTTCAATGTCAATGGACAGACATGACAAAGAAAAAGAAATGGCTGCTGTTCTGCTATCTGCACTTTATGCTGACACAATTGATCCTTCTCAAGTTTACAAGGGCTTCAGTAAGCTAGTTGCATCTGCAGATGACCTGATTGTAGACATACCAGACGCAGTGGATGTTCTAGCGCTTTTCTTGGCTCGAGCTGTGGTTGATGACATACTTCCTCCTGCATTTTTAAAGAAACAGATGGCTTACTTACAGAAGGATTCAAAAGGGATTGAAGTCTTGAAAAAGGCTGAGAAGAACTATCTTGCAGCCCCTCTGCATGCAGAAATCATAGAGCGCCGGTGGGGAGGCAGTAAGAATATGACAGTTGATGATGTGAAGGCTAGAATAAACAATTTGTTGATAGAATATGTAACAAGTGGTGACAAGAAAGAAGCTTTTAGATGCATTAAGGATTTGAAAGTTCCATTTTATCATCATGAGATAGTGAAACGCGCTCTTATAATGGCAATGGAGAGGCGCCAAGCAGAAGGTCCCTTACTAGATCTCTTGAAAGAAGCAGCTGAAGAAGGTTTTATCAACTCAAGTCAAACCTCAAAGGGCTTTGATCGGTTGATTGACACTGTCGATGACTTATCACTTGACATACCAAATGCACGTGAAATACTCCAAAAACTAATGTCCAAGGCAGCATCCGAGGGTTGGCTATGTGTTTCATCTTTGAAATCGCTCTCACCGGAGACAGAGAAAAAGTCACTAGAAGAAAATGCAGCCAGAAGTTTCAAGCTAAAGGCTCAGTCCATAATTCAAGAGTACTTCTTGTCGGGTGATATATTTGAAGTAATTAGTTGTCTTGAGCAAGAGAGCAACACTAGCTCTGCACATCTCAAAGCAATCTTTGTCAAGAGACTTATAACATTAGCTATGGATCGAAAGAAGCGGGAGAAGGAAATGGCCTCGGTTCTGCTTTCATCTCTGTGTTTTCCAGCTGATGATGTTGTTAATGGTTTTGTCATGTTGATAGAATCAGCAGACGACACTGCTCTGGATAATCCAGTAGTGGTGGAGGATCTTGCCATGTTCCTGGCCAGATCAGTAGTGGATGAAGTCCTGGCCCCACAGCATCTAGAAGAGGTTGGAACACAGTGTCTGGGGCAAGATTCAATAGGAAGTAAAGTGCTTCAAATGGCCAAGTCATTGCTAAAGGCCAGGCTTTCTGGGGAGAGAATATTAAGGTGTTGGGGTGGAGGGGGAAGCAGCAGATCTGGGTGGGAAATTGAGGATGTCAAGGACAAGATTATAAACCTTTTGGAGGAGTATGAGTCTGGAGGTGACATAAGGGAGGCATGTCGATGCATGAAAGAACTAGGAATGCCATTTTTTCACCACGAGGTCGTCAAGAAAGCCCTGGTGAAAATCATTGAGAAGAAGAATGACAGGTTGTGGGGTCTGCTCAAGGAATGCTTTGAATCAGGACTGATAACTACCAACCAGATGATGAAGGGGTTTGGAAGGATTGCAGAATCTCTTGATGACTTGGCTTTGGATGTCCCTGATGCTAAGAAACAGTTTATACACTACGTGGAACGAGCAAAGAGCTCAGAATGGTTGGATGCTTCATTTAGTCTCAGCAAATTTGAACATTCAACGGAGAATGGAACCTGCTAA 1878 0.4239 MNFLDPHDPNYDSTEENEPSNEKKKKGELDEYKKKATIIVEEYFTTDDIVAVKNELRELGTPYFSYYFVKKLVSMSMDRHDKEKEMAAVLLSALYADTIDPSQVYKGFSKLVASADDLIVDIPDAVDVLALFLARAVVDDILPPAFLKKQMAYLQKDSKGIEVLKKAEKNYLAAPLHAEIIERRWGGSKNMTVDDVKARINNLLIEYVTSGDKKEAFRCIKDLKVPFYHHEIVKRALIMAMERRQAEGPLLDLLKEAAEEGFINSSQTSKGFDRLIDTVDDLSLDIPNAREILQKLMSKAASEGWLCVSSLKSLSPETEKKSLEENAARSFKLKAQSIIQEYFLSGDIFEVISCLEQESNTSSAHLKAIFVKRLITLAMDRKKREKEMASVLLSSLCFPADDVVNGFVMLIESADDTALDNPVVVEDLAMFLARSVVDEVLAPQHLEEVGTQCLGQDSIGSKVLQMAKSLLKARLSGERILRCWGGGGSSRSGWEIEDVKDKIINLLEEYESGGDIREACRCMKELGMPFFHHEVVKKALVKIIEKKNDRLWGLLKECFESGLITTNQMMKGFGRIAESLDDLALDVPDAKKQFIHYVERAKSSEWLDASFSLSKFEHSTENGTC 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci140g0015 625 Pfam MA3 domain 33 143 IPR003891 -
Prci140g0015 625 Pfam MA3 domain 332 441 IPR003891 -
Prci140g0015 625 Pfam MA3 domain 500 608 IPR003891 -
Prci140g0015 625 Pfam MA3 domain 197 306 IPR003891 -
Prci140g0015 625 SUPERFAMILY ARM repeat 29 189 IPR016024 -
Prci140g0015 625 SUPERFAMILY ARM repeat 191 313 IPR016024 -
Prci140g0015 625 MobiDBLite consensus disorder prediction 9 28 - -
Prci140g0015 625 SUPERFAMILY ARM repeat 329 488 IPR016024 -
Prci140g0015 625 SMART ma3_7 499 608 IPR003891 -
Prci140g0015 625 SMART ma3_7 331 442 IPR003891 -
Prci140g0015 625 SMART ma3_7 196 307 IPR003891 -
Prci140g0015 625 SMART ma3_7 32 143 IPR003891 -
Prci140g0015 625 SUPERFAMILY ARM repeat 494 612 IPR016024 -
Prci140g0015 625 ProSiteProfiles MI domain profile. 498 617 IPR003891 -
Prci140g0015 625 Gene3D - 482 614 - -
Prci140g0015 625 Gene3D - 182 314 - -
Prci140g0015 625 FunFam programmed cell death protein 4 320 475 - -
Prci140g0015 625 ProSiteProfiles MI domain profile. 31 152 IPR003891 -
Prci140g0015 625 FunFam programmed cell death protein 4 21 174 - -
Prci140g0015 625 ProSiteProfiles MI domain profile. 330 451 IPR003891 -
Prci140g0015 625 Gene3D - 317 474 - -
Prci140g0015 625 Gene3D - 19 171 - -
Prci140g0015 625 MobiDBLite consensus disorder prediction 1 28 - -
Prci140g0015 625 ProSiteProfiles MI domain profile. 195 316 IPR003891 -
Prci140g0015 625 PANTHER PROGRAMMED CELL DEATH 4 4 611 IPR039778 GO:0045892
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci140g0015 498 594 Eukaryotic Initiation Factors Gene Family AT4G30680 30.000 1.92e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci140g0015 - - pcin:129295573 1209.51