Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci140g0013 ATGGATACCAGTAATGGTTCTACGTTAAGTGAACATCGCAAACCTCATGAATCAGTTTCAAAAAGTGCAGATTCATTATCTGTTCCTCCATTGCAAACTTCTCCAAAGTCACCGAAATCCTGTGGCTCTCCAAGGTCCCCTAGGTTCCAAGTCAAGGGCGGCAAGCGAAGTCCAAATCATGATAAGCACCCATATTCTTCAAGAGACGGATGTCCCAAGAAAGAATGTGCAGATCCATTCTCTGTTACTTCATTGAAAATTTCTCCAAAGACACCGGCATCCCCCACTTCTCCAAAGTCTCCGAGGTCCCCAAGGTTACCTGGCCATAGTCCAAAGAATGAAAGGCAATCACGTTCGCCACGAGATGGACGACCAAAGAAAGGAGGTTGTGGAGGGAAAGGCACGTGGGGAGGATTGCTTGATACTGAAGACATGAACTTTCTTGACCCTCATGATCCAAACTATGACAGCACTGAGGAAAATGAACCTTCGAATGAAAAGAAAAAGAAAGGGGAGTTAGATGAGTACAAGAAGAAAGCTACAATAATAGTGGAGGAATATTTCACCACCGATGATATTGTTGCTGTAAAAAACGAACTGAGAGAACTTGGAACGCCATACTTCAGCTACTATTTTGTCAAGAAGCTTGTTTCAATGTCAATGGACAGACATGACAAAGAAAAAGAAATGGCTGCTGTTCTGCTATCTGCACTTTATGCTGACACAATTGATCCTTCTCAAGTTTACAAGGGCTTCAGTAAGCTAGTTGCATCTGCAGATGACCTGATTGTAGACATACCAGACGCAGTGGATGTTCTAGCGCTTTTCTTGGCTCGAGCTGTGGTTGATGACATACTTCCTCCTGCATTTTTAAAGAAACAGATGGCTTACTTACAGAAGGATTCAAAAGGGATTGAAGTCTTGAAAAAGGCTGAGAAGAACTATCTTGCAGCCCCTCTGCATGCAGAAATCATAGAGCGCCGGTGGGGAGGCAGTAAGAATATGACAGTTGATGATGTGAAGGCTAGAATAAACAATTTGTTGATAGAATATGTAACAAGTGGTGACAAGAAAGAAGCTTTTAGATGCATTAAGGATTTGAAAGTTCCATTTTATCATCATGAGATAGTGAAACGCGCTCTTATAATGGCAATGGAGAGGCGCCAAGCAGAAGGTCCCTTACTAGATCTCTTGAAAGAAGCAGCTGAAGAAGGTTTTATCAACTCAAGTCAAACCTCAAAGGGCTTTGATCGGTTGATTGACACTGTCGATGACTTATCACTTGACATACCAAATGCACGTGAAATACTCCAAAAACTAATGTCCAAGGCAGCATCCGAGGGTTGGCTATGTGTTTCATCTTTGAAATCGCTCTCACCGGAGACAGAGAAAAAGTCACTAGAAGAAAATGCAGCCAGAAGTTTCAAGCTAAAGGCTCAGTCCATAATTCAAGAGTACTTCTTGTCGGGTGATATATTTGAAGTAATTAGTTGTCTTGAGCAAGAGAGCAACACTAGCTCTGCACATCTCAAAGCAATCTTTGTCAAGAGACTTATAACATTAGCTATGGATCGAAAGAAGCGGGAGAAGGAAATGGCCTCGGTTCTGCTTTCATCTCTGTGTTTTCCAGCTGATGATGTTGTTAATGGTTTTGTCATGTTGATAGAATCAGCAGACGACACTGCTCTGGATAATCCAGTAGTGGTGGAGGATCTTGCCATGTTCCTGGCCAGATCAGTAGTGGATGAAGTCCTGGCCCCACAGCATCTAGAAGAGGTTGGAACACAGTGTCTGGGGCAAGATTCAATAGGAAGTAAAGTGCTTCAAATGGCCAAGTCATTGCTAAAGGCCAGGCTTTCTGGGGAGAGAATATTAAGGTGTTGGGGTGGAGGGGGAAGCAGCAGATCTGGGTGGGAAATTGAGGATGTCAAGGACAAGATTATAAACCTTTTGGAGGAGTATGAGTCTGGAGGTGACATAAGGGAGGCATGTCGATGCATGAAAGAACTAGGAATGCCATTTTTTCACCACGAGGTCGTCAAGAAAGCCCTGGTGAAAATCATTGAGAAGAAGAATGACAGGTTGTGGGGTCTGCTCAAGGAATGCTTTGAATCAGGACTGATAACTACCAACCAGATGATGAAGGGGTTTGGAAGGATTGCAGAATCTCTTGATGACTTGGCTTTGGATGTCCCTGATGCTAAGAAACAGTTTATACACTACGTGGAACGAGCAAAGAGCTCAGAATGGTTGGATGCTTCATTTAGTCTCAGCAAATTTGAACATTCAACGGAGAATGGAACCTGCTAA 2310 0.432 MDTSNGSTLSEHRKPHESVSKSADSLSVPPLQTSPKSPKSCGSPRSPRFQVKGGKRSPNHDKHPYSSRDGCPKKECADPFSVTSLKISPKTPASPTSPKSPRSPRLPGHSPKNERQSRSPRDGRPKKGGCGGKGTWGGLLDTEDMNFLDPHDPNYDSTEENEPSNEKKKKGELDEYKKKATIIVEEYFTTDDIVAVKNELRELGTPYFSYYFVKKLVSMSMDRHDKEKEMAAVLLSALYADTIDPSQVYKGFSKLVASADDLIVDIPDAVDVLALFLARAVVDDILPPAFLKKQMAYLQKDSKGIEVLKKAEKNYLAAPLHAEIIERRWGGSKNMTVDDVKARINNLLIEYVTSGDKKEAFRCIKDLKVPFYHHEIVKRALIMAMERRQAEGPLLDLLKEAAEEGFINSSQTSKGFDRLIDTVDDLSLDIPNAREILQKLMSKAASEGWLCVSSLKSLSPETEKKSLEENAARSFKLKAQSIIQEYFLSGDIFEVISCLEQESNTSSAHLKAIFVKRLITLAMDRKKREKEMASVLLSSLCFPADDVVNGFVMLIESADDTALDNPVVVEDLAMFLARSVVDEVLAPQHLEEVGTQCLGQDSIGSKVLQMAKSLLKARLSGERILRCWGGGGSSRSGWEIEDVKDKIINLLEEYESGGDIREACRCMKELGMPFFHHEVVKKALVKIIEKKNDRLWGLLKECFESGLITTNQMMKGFGRIAESLDDLALDVPDAKKQFIHYVERAKSSEWLDASFSLSKFEHSTENGTC 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci140g0013 769 Gene3D - 461 618 - -
Prci140g0013 769 Gene3D - 163 315 - -
Prci140g0013 769 FunFam programmed cell death protein 4 165 318 - -
Prci140g0013 769 SUPERFAMILY ARM repeat 473 632 IPR016024 -
Prci140g0013 769 SUPERFAMILY ARM repeat 638 756 IPR016024 -
Prci140g0013 769 ProSiteProfiles MI domain profile. 474 595 IPR003891 -
Prci140g0013 769 FunFam programmed cell death protein 4 464 619 - -
Prci140g0013 769 MobiDBLite consensus disorder prediction 21 44 - -
Prci140g0013 769 ProSiteProfiles MI domain profile. 339 460 IPR003891 -
Prci140g0013 769 SMART ma3_7 176 287 IPR003891 -
Prci140g0013 769 SMART ma3_7 643 752 IPR003891 -
Prci140g0013 769 SMART ma3_7 475 586 IPR003891 -
Prci140g0013 769 SMART ma3_7 340 451 IPR003891 -
Prci140g0013 769 MobiDBLite consensus disorder prediction 1 172 - -
Prci140g0013 769 MobiDBLite consensus disorder prediction 54 75 - -
Prci140g0013 769 MobiDBLite consensus disorder prediction 108 128 - -
Prci140g0013 769 Gene3D - 626 758 - -
Prci140g0013 769 Gene3D - 326 458 - -
Prci140g0013 769 ProSiteProfiles MI domain profile. 175 296 IPR003891 -
Prci140g0013 769 MobiDBLite consensus disorder prediction 145 172 - -
Prci140g0013 769 PANTHER PROGRAMMED CELL DEATH 4 88 755 IPR039778 GO:0045892
Prci140g0013 769 SUPERFAMILY ARM repeat 335 457 IPR016024 -
Prci140g0013 769 ProSiteProfiles MI domain profile. 642 761 IPR003891 -
Prci140g0013 769 Pfam MA3 domain 341 450 IPR003891 -
Prci140g0013 769 Pfam MA3 domain 476 585 IPR003891 -
Prci140g0013 769 Pfam MA3 domain 177 287 IPR003891 -
Prci140g0013 769 Pfam MA3 domain 644 752 IPR003891 -
Prci140g0013 769 SUPERFAMILY ARM repeat 173 333 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci140g0013 642 738 Eukaryotic Initiation Factors Gene Family AT4G30680 30.000 1.55e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci140g0013 - - pcin:129295573 1456.04