Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci140g0001 ATGGGTTTGGAGTCAGACTCCGAGTGTTTCAGCAAAATGATGGCTTCGATGCCGGGGTTTCGCTTCCACCCTACGGACGAGGAGCTGGTCATGTATTATCTGAAGAGGAAGATGTCTGGGAGGAAACTGAAGCTCGACGTGATCCGGGAGACTGACGTCTACAAGTGGGACCCAGAGGAATTGCCTGCGCAATCTGGACTAAAAACTGGAGATAGGCAATGGTTTTTTTTCAGTCCTAGAGATAGGAAGTACCCTAACGCTGCAAGGTCAAGTAGAGCAACGAGACATGGGTACTGGAAAGCTACAGGAAAAGATCGTAATGTGACATACACTTCCCGAACTGTTGGAGTTAAAAAGACACTGGTTTTTTATAAAGGTAGAGCACCTAATGGTGAGCGGACTGATTGGGTTATGCATGAATACACCTTGGATGAACAAGAGCTTCAAAGATGCCAAGGCATTAAGGACTATTTTGCACTCTACAAGATTTACAAAAAAAGTGGACCTGGCCCTAAAAACGGTGAACAGTATGGTGCACCATTTAATGAAGAAGAGTGGGCAGATGATGATTTTGGAGATTGTAATATAACCTGGGCTGACTTTGAAGTTCCAACACAGCAACGTGATGGTGTTACTTCTGTTGATACTGTCAATGTTAATGGTCCATTGCAGCCGTTGCTTGATGATGAAATTGAGGAGATCATGAAGAAACTTATGGATGATGAGTCTCTCCACGAACAGCAGAATGTGAATGGTCGTCCTGCCTTACCTCCAGGGGTTGCTGAGGAAACACAGAATGGCGTGGTTGATCAATTCTATATGGAAGTCATGTTTCCTGAGCCATTGGGACTGTTTCACTCAAGTGGTGTTCAGCAATGTGGCGTGGATCCCAGTTCTGACTTCCCTCAGTCAGCTATTTCTCACCTGCAAACGCCTGAAGCTCCTAAGTTCACTTCTACCCTTAACACTAAAGGGGCAGAAACTGGCTTGTGTGAGGATGACTTCTTGGAATTGGATGATCTCATTGGTCCTGAACATGCATTGCTAAACATCAATAAGCCTGTGGAGAACCTGCAGTTTGAAGATGGATTAAGTGAACTTGATCTGTACCATGATGCGCAGATGTTTCTTCATGACATGGGGCCGATTTCACATCCGTATATGAACACTCTGGATAATGCTATTGTAGATCAAAATTATGAGCTGCTGTCAAATCAAGAAAATGCAAATCAAACTGGTGAACTCATGATGCATGCTCAAAGAAACATCCTGCATCCAGCAGAACACGTCAATGTTTCTACACATCTGCCAACATCAGGTGTACTATATGAGTCTGCCAGATTTCTTACTGAAAGCAATGGGACTGAAGAAAGCACTGTGGGAGGCGTTGCTGCAAGTAAATTATCTTCTTCTCTCTGGAACTTTGTTGAGTCAATACCATCCTCTCCTGCATCAGCATCTGAAAATGCTTTGGTGAATCGGGCCTTTGAGCGATTGTCTAGCTTCAATAAGTTGAAGATTGGTGTGAAGGACACAAACGTTGCTGCAGGTAATGACACCGCAACTCTGAAGGGAGGAGGCAAAAAAGGGGCTATCTTCCTTTTCTTTCCAGTTCTTGTTGCCTTATGTGCTTTCTTATGGGTTTCTTTAGGAACTTTAAGACTATTAGGTGTGCCTAGCTCTTGA 1686 0.4407 MGLESDSECFSKMMASMPGFRFHPTDEELVMYYLKRKMSGRKLKLDVIRETDVYKWDPEELPAQSGLKTGDRQWFFFSPRDRKYPNAARSSRATRHGYWKATGKDRNVTYTSRTVGVKKTLVFYKGRAPNGERTDWVMHEYTLDEQELQRCQGIKDYFALYKIYKKSGPGPKNGEQYGAPFNEEEWADDDFGDCNITWADFEVPTQQRDGVTSVDTVNVNGPLQPLLDDEIEEIMKKLMDDESLHEQQNVNGRPALPPGVAEETQNGVVDQFYMEVMFPEPLGLFHSSGVQQCGVDPSSDFPQSAISHLQTPEAPKFTSTLNTKGAETGLCEDDFLELDDLIGPEHALLNINKPVENLQFEDGLSELDLYHDAQMFLHDMGPISHPYMNTLDNAIVDQNYELLSNQENANQTGELMMHAQRNILHPAEHVNVSTHLPTSGVLYESARFLTESNGTEESTVGGVAASKLSSSLWNFVESIPSSPASASENALVNRAFERLSSFNKLKIGVKDTNVAAGNDTATLKGGGKKGAIFLFFPVLVALCAFLWVSLGTLRLLGVPSS 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci140g0001 561 Gene3D NAC domain 25 168 IPR036093 GO:0003677|GO:0006355
Prci140g0001 561 FunFam Nac domain-containing protein 86 25 169 - -
Prci140g0001 561 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Prci140g0001 561 Pfam No apical meristem (NAM) protein 18 143 IPR003441 GO:0003677|GO:0006355
Prci140g0001 561 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 230 - -
Prci140g0001 561 SUPERFAMILY NAC domain 12 166 IPR036093 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci140g0001 1 557 NAC Transcription Factor Family AT1G34190 41.611 2.33e-125 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci140g0001 NAM 3.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci140g0001 - - gmx:100794925 650.203