Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2620 ATGAGTTGCTTTCCTTGTTTTTCATGCAACGACAAGAAAGCAGCACCGAAGAAGCCCAAACAAGGAATTAGGGCGCAAATGCAGCCATGTCAACCTCAAAAGGAAGCCCTACTTCCTCGGGCCCACCCTGAGAATAATTATTCTTCAAAGCCAAACGAGGGAAGACCAAATAATTATAGTAATGTCAACAAAGACGGCGGCAGCAATAACATCGCTGCGGAAACTTTCACCTTCAGGGAATTGGCCGCCGCCACAAGGAACTTTCGGCGAGAATGCCTCATTGGTGAAGGTGGTTTTGGAAGAGTTTATAAAGGAAAACTCGACAAAACCAACCAGATTATAGCTGTGAAGCAGCTGGACAGAAATGGATTGCAGGGAAATAGAGAGTTCCTTGTTGAAGTGTTGATGTTAAGCCTCTTACACCATGGAAATCTGGTGAATCTTATTGGATATTGTGCGGACGGAGATCAAAGATTATTGGTGTATGAGTACATGCCTTTGGGTTCTGTAGAAGACCATCTTCTAGATCTAGAACCTCACGAGAGGCCGTTAGATTGGTCTGTGAGAATGAAAATAGCATTGGAAGCATCCAAAGGTCTAGAATATTTGCACGATAAGGCGAATCCTCCAGTGATATACCGAGACTTGAAGGCCTCAAATATATTGCTGGACAAGGGGTTTCATGCAAAGCTGTCGGATTTTGGACTGGCCAAGCTAGGACCCACAGGAGACAAGTCTCATGTCTCCTCCCGGGTTATGGGAACCTATGGCTATTGTGCCCCAGAGTATCAAAGAACTGGCCAGCTCACCGTCAAATCTGATGTCTACAGCTTTGGTGTGGTTTTACTCGAACTCCTCACGGGAAAGCGAGTCATTGACAACACCAGACCCACCCGCGAGCAAAATCTTGTTTCTTGGGCAAGACCAATATTCAAGGATCCTAATAGATACCTTGAGCTGGCCGATCCCCTTCTCCAAAGAAACTTCCCCGTCAGAGCTTTCAACCAGGCAGTGGCAGTGGCCGCCATGTGCCTTAACGAGGAACCCTCTGCCCGGCCATTGATCAGCGACGTCGTCACCGCCCTTACTTTTCTCGGCACAGACTACGAAGCCGACCACCCTCCCCCTGCCACCGACATTATTCCCCCGTCACCACCGCAACAACATTTTAACCTTCTTGATAATGACACCATTGTCGAACGTCAACAAGCCGTTGCTGAGGCTATAAAATGGGGTTCGGCTTCAAGGAATAATGCTGTCCATAGAGCAAATGCAGGTGCAAATGCTTCCTCTTTGTAA 1299 0.475 MSCFPCFSCNDKKAAPKKPKQGIRAQMQPCQPQKEALLPRAHPENNYSSKPNEGRPNNYSNVNKDGGSNNIAAETFTFRELAAATRNFRRECLIGEGGFGRVYKGKLDKTNQIIAVKQLDRNGLQGNREFLVEVLMLSLLHHGNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLLDLEPHERPLDWSVRMKIALEASKGLEYLHDKANPPVIYRDLKASNILLDKGFHAKLSDFGLAKLGPTGDKSHVSSRVMGTYGYCAPEYQRTGQLTVKSDVYSFGVVLLELLTGKRVIDNTRPTREQNLVSWARPIFKDPNRYLELADPLLQRNFPVRAFNQAVAVAAMCLNEEPSARPLISDVVTALTFLGTDYEADHPPPATDIIPPSPPQQHFNLLDNDTIVERQQAVAEAIKWGSASRNNAVHRANAGANASSL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2620 432 CDD STKc_IRAK 94 363 - -
Prci13g2620 432 ProSiteProfiles Protein kinase domain profile. 88 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2620 432 FunFam Serine/threonine-protein kinase PBS1 165 378 - -
Prci13g2620 432 Gene3D Phosphorylase Kinase; domain 1 60 164 - -
Prci13g2620 432 MobiDBLite consensus disorder prediction 13 66 - -
Prci13g2620 432 PANTHER OS07G0668900 PROTEIN 6 370 - -
Prci13g2620 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Prci13g2620 432 ProSitePatterns Protein kinases ATP-binding region signature. 94 117 IPR017441 GO:0005524
Prci13g2620 432 MobiDBLite consensus disorder prediction 45 66 - -
Prci13g2620 432 Pfam Protein kinase domain 91 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2620 432 Gene3D Transferase(Phosphotransferase) domain 1 165 373 - -
Prci13g2620 432 SUPERFAMILY Protein kinase-like (PK-like) 73 391 IPR011009 -
Prci13g2620 432 FunFam Serine/threonine-protein kinase PBS1 61 164 - -
Prci13g2620 432 SMART serkin_6 88 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2620 Prci-Chr13 40257151 40261314 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2620 1 416 Glycoside Hydrolase AT3G07070 65.625 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Prci13g2620 Pkinase 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2620 - - gmx:100786405 617.846