Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2589 ATGGAACTAAATAAGCCGGAAATTTTGTTCGTTGCCAACCCTAGAAGGGCTCCAGAGTTTGGACATGAAGGAATTGCTCATAGAAGAGAACCTGCTGCCCCTGATTCACTTCGAAAGCATGAAGTTAGGTTTGGATTTCACGGGGAGAATGGCCAAGTGAGATATGAGGATCTTACTAATATTCTGGGATCGAAGAGACTGGACTCTGAGAATCCTTTTGAGATTGCTGATCTTAACTTCACAAGAGAGCCAACTCAAGAGATGGAAAATGGGGCTTTCGTTGATAAAAATAGCAAAAGTCAAAAGGAAGATGGTAATGTAACACAAGGAGCGAGGAAGACTCTTGGTGAATCAGTTGGTGACCAAGCTGATACCGGAGCACCTGGGTCTCCCTTCCTTAGAAAAGAATCCTCCTATTCCAATGAAGTTTCTGGTTTAGGAGCGTCAGATGATTCTCAATCTGGAAAAATCAAATTGCTGTGCAGCTTTGGTGGAAAAGTATTACCAAGGCCCAGGGATGGGAAACTCAGATATGTAGGGGGAGAGACTCGCATTATATCTATCCGAAAGGATATTTCATGGCAAGGGCTTCTTAAGAAGACCCTGGGTATTTGCATTCAGCCTCACTCAATTAAGTACCAGCTTCCAGGTGAGGATCTTGATTCTCTAATATCTGTCTCCTCTGATGAGGATCTTCAAAATATGATAGAAGAATACCATGGGCCTGAAAGGCATAAGGGATCTCAAAGACTTCGAATTTTCTTAATTCCCTTGAGTGAATCTGAAAAGGAATTGTCATTTGAATCAAGAACTGATCAGCAGAGTAATCCTGATTACCAATATGTTGTTGCTGTGAATGGCATAGGGGACTGTAGTCCAAGAATAAATAGTTTAGGGCAGATCTTGACAAATGAAGTTGGTCCACCAGGAACAGATTTGAATTTTGCTCCAGACTTCCAGAAAATATTTCCAAATGCACCTTCTTCAGAGATCAAGGGTGGTGGTATTGCTATATATCCAAATGGATTTTTTAATGATTCTCAGAATCTGCAGAGGACCTCCAATCAACATCAACAGATTTCTTCTACTCCATTTCAGGGAGGAAATTTGAGCACAATTTTAACACAGTCTCGTGGTAATAACTCATGCCAGGAAAGTGCTACAAGCAGCTCATCCTTTATTACTGCCCAACTATCACCTGAGACGTCCAATGTAAGTGCTGCTGATAGCAGATACTCCCCACAAATGGCTGCAACTTTCCTAAGCGACAATCAACCCTGCCAACAAACTGATATTGGTCTGCCAGAGCAGTACTGTGGGAAGCTATTCAGAAATAATCCCGGGAAGGAATTTATGACTGCTTTGTTTGCTAATCAAAGTGACAGCTGTAATGATGAAATTTTGGGTGAAGGGTCCATGCATAAATCGGGAAATCCTCTTTCCAGCCTGGGTGAGTCAGTTAGTCCACAGTCTGGATCTAATTGCATTCCTGATTCTCTAAATGGGATACCTCATGCATTTTCTGATTCAAAGTTGCATGAGAGTGGATTTAAGTCTGGTTACTGCTCTCAAGAAGGGATTGGTCAATTTTCCTCATTGAACCTTTCAATGGCTCAGTTATCTTCTATGGTACCCTCTAGTGTTTCACAAAGGGACCCTATGGAAATCCAGCATGATCCTCTTCTCGTTTATCCACAAATACAAAGTAAGATGCCAATTGTGGAGCCAGGTGAGTCTCACGGAAGGCAGGATTTTCCAATTTCTTTACCGTCTACAGTATGTTTAGGAGTGAATGATCCTATTCAGAAGGATAGCATTTTATACAGTAAGAGGAATCCTTTAGCTCAAACTGATTTAACTGCATCTATCTTTATGGAGCGGCAGTGTGGGGACAATACTGTGAATATAGAAATCATGAAGAGAATGGAAGATGAAAATTCTCTTCAGAGTAAGGATAGCAATCTTTATGAGAGGGAATCACCTGCCATTGCTATGGAGCATGTGAATGAATTGCATCTTCTGGACTCTTCTCCAACATCTAATTTAAACACTAAGATTCATAAACAAAATCAGTTGGAGCAATCTTCTGAGGGTATGGTTTCTGCATCCTTTTGCTTGACAGGAATTTCCCAAAATAATCTGATTGAGATGACCCCATCAGATTTTCTTGCAATGAGCCACAGGACTAATGATGGAAGGGAATGTGGTTTTACTGAAGGTTTGAATGGTGAGCTAGGATTTGATTTTTCTTGGACCAGAAAATCTGGGTTTAATGCTTCATCTCTAAAATGCGAAGGAAACTCTAGTGGTAACACTTCTCAAAGTAATCATTTGTTCGAGCTGCCGATGGACCTGGTTTCTCATAAACAAGCACAAGTTCAACCTTTACGGAAGGATACAGATCTCTATGGAAATCCGACAGTAAGCTCAGGTTTTTTGTATTCTTCAGCACTTCATGATGACCCTGGTCCTAGTTCAAATTTGCCTGTGAATGAACTACAGAACTCAAGCAAGAATATTGTGTTTAAAAGAGTATCTTCTCTCATTGATGATGACCTTATAGCTAGTTCTAGTCAAATGGTTGATCAGTATAGTTGTGGAACTCTTGCCTGTGAAACAAGAGTTGAAGATATCATGTTGGAGCAATCAAAAATTTTTGAAAAGAGTGACAACTCAAATAAAATTGAGCCGCTTATTACTATAGAAGATGTGACCAATGTTGTTCCTCCAAGCATTGAGTCTTCATTGGCGCCCATCCAGCATATAGTCGTTGAAATTGGAAGTGATGTTTTATCCCCATCTGCGGCAGATTTGGAGAGCACTATTCCAGATTCTGAACTTGAGGATTTTAAAGATGAAGAAGGCAAGAATGAATCCCTTACCGATGCAAGGGTAGCAGAAATGGAAGCCAGCATCTACGGCTTGCAGATAATTCGAAATGCTGATCTCGAAGAACTTCGGGAGTTAGGATCTGGTACTTATGGAACTGTTTATCATGGAAAATGGAGGGGAACGGATGTTGCTATAAAGAGAATTAAAAAGAGCTGCTTTTTAGGAAGATCTTCTGAGCAAGAACGATTGACAAAAGACTTTTGGAGAGAGGCACAAATCCTCTCAAATCTCCACCACCCCAACGTGGTGGCTTTTTATGGGGTTGTACCAGACGGAGCTGGAGGAACCTTGGCAACTGTGACTGAGTATATGGTTAACGGTTCCCTTAGACATGTCCTTGTCAAGAAGGATAGATTACTTGATCGTCATAGAAAGCTAATAATTGCCATGGATGCAGCTTTTGGAATGGAATACTTGCATTCAAAGAATATTGTTCATTTTGATTTGAAATGTGACAATTTACTCGTCAATCTGAGGGATCCACTGCGACCCATATGTAAGGTTGGAGATTTTGGATTATCAAGAATTAAACGCAATACCCTGGTATCTGGTGGAGTGCGAGGAACCCTTCCTTGGATAGCACCAGAGCTGTTAAATGGCAGTAGCAACCAGGTTTCTGAGAAGGTTGATGTTTTCTCGTTTGGCATCTCTATGTGGGAGATATTGACTGGGGAGGAACCTTATGCAGATATGCATTGTGGCGCTATTATAGGGGGGATTGTAAAGAATACTCTCCGACCACCAATTCCACCACATTGTGACCCTGAATGGAGGAAGCTTATGGAAGAATGTTGGTCACCTGACCCTGATAGCCGACCATCTTTTACTGAGATAACGAGCCGACTCCGATCAATGTCTATGGCCCTTCAAGCTAAGCCTCATAATCAGGTGCGGTAG 3789 0.4138 MELNKPEILFVANPRRAPEFGHEGIAHRREPAAPDSLRKHEVRFGFHGENGQVRYEDLTNILGSKRLDSENPFEIADLNFTREPTQEMENGAFVDKNSKSQKEDGNVTQGARKTLGESVGDQADTGAPGSPFLRKESSYSNEVSGLGASDDSQSGKIKLLCSFGGKVLPRPRDGKLRYVGGETRIISIRKDISWQGLLKKTLGICIQPHSIKYQLPGEDLDSLISVSSDEDLQNMIEEYHGPERHKGSQRLRIFLIPLSESEKELSFESRTDQQSNPDYQYVVAVNGIGDCSPRINSLGQILTNEVGPPGTDLNFAPDFQKIFPNAPSSEIKGGGIAIYPNGFFNDSQNLQRTSNQHQQISSTPFQGGNLSTILTQSRGNNSCQESATSSSSFITAQLSPETSNVSAADSRYSPQMAATFLSDNQPCQQTDIGLPEQYCGKLFRNNPGKEFMTALFANQSDSCNDEILGEGSMHKSGNPLSSLGESVSPQSGSNCIPDSLNGIPHAFSDSKLHESGFKSGYCSQEGIGQFSSLNLSMAQLSSMVPSSVSQRDPMEIQHDPLLVYPQIQSKMPIVEPGESHGRQDFPISLPSTVCLGVNDPIQKDSILYSKRNPLAQTDLTASIFMERQCGDNTVNIEIMKRMEDENSLQSKDSNLYERESPAIAMEHVNELHLLDSSPTSNLNTKIHKQNQLEQSSEGMVSASFCLTGISQNNLIEMTPSDFLAMSHRTNDGRECGFTEGLNGELGFDFSWTRKSGFNASSLKCEGNSSGNTSQSNHLFELPMDLVSHKQAQVQPLRKDTDLYGNPTVSSGFLYSSALHDDPGPSSNLPVNELQNSSKNIVFKRVSSLIDDDLIASSSQMVDQYSCGTLACETRVEDIMLEQSKIFEKSDNSNKIEPLITIEDVTNVVPPSIESSLAPIQHIVVEIGSDVLSPSAADLESTIPDSELEDFKDEEGKNESLTDARVAEMEASIYGLQIIRNADLEELRELGSGTYGTVYHGKWRGTDVAIKRIKKSCFLGRSSEQERLTKDFWREAQILSNLHHPNVVAFYGVVPDGAGGTLATVTEYMVNGSLRHVLVKKDRLLDRHRKLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPLRPICKVGDFGLSRIKRNTLVSGGVRGTLPWIAPELLNGSSNQVSEKVDVFSFGISMWEILTGEEPYADMHCGAIIGGIVKNTLRPPIPPHCDPEWRKLMEECWSPDPDSRPSFTEITSRLRSMSMALQAKPHNQVR 1262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2589 1262 SMART serkin_6 983 1252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2589 1262 Pfam PB1 domain 172 255 IPR000270 GO:0005515
Prci13g2589 1262 SMART PB1_new 171 258 IPR000270 GO:0005515
Prci13g2589 1262 PANTHER SERINE-THREONINE PROTEIN KINASE 209 1249 - -
Prci13g2589 1262 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1108 1120 IPR008271 GO:0004672|GO:0006468
Prci13g2589 1262 MobiDBLite consensus disorder prediction 113 153 - -
Prci13g2589 1262 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 176 258 - -
Prci13g2589 1262 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1071 1262 - -
Prci13g2589 1262 Gene3D - 175 257 - -
Prci13g2589 1262 MobiDBLite consensus disorder prediction 470 491 - -
Prci13g2589 1262 Gene3D Transferase(Phosphotransferase) domain 1 1071 1261 - -
Prci13g2589 1262 ProSiteProfiles Protein kinase domain profile. 983 1253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2589 1262 MobiDBLite consensus disorder prediction 89 108 - -
Prci13g2589 1262 ProSitePatterns Protein kinases ATP-binding region signature. 989 1014 IPR017441 GO:0005524
Prci13g2589 1262 CDD PB1_UP2 160 256 - -
Prci13g2589 1262 MobiDBLite consensus disorder prediction 475 491 - -
Prci13g2589 1262 CDD STKc_MAP3K-like 989 1246 - -
Prci13g2589 1262 MobiDBLite consensus disorder prediction 134 151 - -
Prci13g2589 1262 Pfam Protein tyrosine and serine/threonine kinase 984 1246 IPR001245 GO:0004672|GO:0006468
Prci13g2589 1262 SUPERFAMILY CAD & PB1 domains 173 258 - -
Prci13g2589 1262 SUPERFAMILY Protein kinase-like (PK-like) 972 1245 IPR011009 -
Prci13g2589 1262 Gene3D Phosphorylase Kinase; domain 1 976 1070 - -
Prci13g2589 1262 PRINTS Tyrosine kinase catalytic domain signature 1217 1239 IPR001245 GO:0004672|GO:0006468
Prci13g2589 1262 PRINTS Tyrosine kinase catalytic domain signature 1065 1078 IPR001245 GO:0004672|GO:0006468
Prci13g2589 1262 PRINTS Tyrosine kinase catalytic domain signature 1173 1195 IPR001245 GO:0004672|GO:0006468
Prci13g2589 1262 PRINTS Tyrosine kinase catalytic domain signature 1102 1120 IPR001245 GO:0004672|GO:0006468
Prci13g2589 1262 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 976 1070 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2589 Prci-Chr13 39978351 39987970 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2589 154 297 MAP Kinase Kinase Kinase AT1G16270 59.028 1.08e-41 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Prci13g2589 PK_Tyr_Ser-Thr 8.2e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2589 - - gmx:100809991 1333.55