Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2588 ATGGAACTAAATAAGCCGGAAATTTTGTTCGTTGCCAACCCTAGAAGGGCTCCAGGTGTGTTTACTCAATACATACTTGCAGAATCAGCAAGCGATGTTTTAAAAACAGGTCAGGATTTACATAATGACGTCTTAATACAGCCGGGGAAAGAATTTTCTGCAGAGTTTGGACATGAAGGAATTGCTCATAGAAGAGAACCTGCTGCCCCTGATTCACTTCGAAAGCATGAAGTTAGGTTTGGATTTCACGGGGAGAATGGCCAAGTGAGATATGAGGATCTTACTAATATTCTGGGATCGAAGAGACTGGACTCTGAGAATCCTTTTGAGATTGCTGATCTTAACTTCACAAGAGAGCCAACTCAAGAGATGGAAAATGGGGCTTTCGTTGATAAAAATAGCAAAAGTCAAAAGGAAGATGGTAATGTAACACAAGGAGCGAGGAAGACTCTTGGTGAATCAGTTGGTGACCAAGCTGATACCGGAGCACCTGGGTCTCCCTTCCTTAGAAAAGAATCCTCCTATTCCAATGAAGTTTCTGGTTTAGGAGCGTCAGATGATTCTCAATCTGGAAAAATCAAATTGCTGTGCAGCTTTGGTGGAAAAGTATTACCAAGGCCCAGGGATGGGAAACTCAGATATGTAGGGGGAGAGACTCGCATTATATCTATCCGAAAGGATATTTCATGGCAAGGGCTTCTTAAGAAGACCCTGGGTATTTGCATTCAGCCTCACTCAATTAAGTACCAGCTTCCAGGTGAGGATCTTGATTCTCTAATATCTGTCTCCTCTGATGAGGATCTTCAAAATATGATAGAAGAATACCATGGGCCTGAAAGGCATAAGGGATCTCAAAGACTTCGAATTTTCTTAATTCCCTTGAGTGAATCTGAAAAGGAATTGTCATTTGAATCAAGAACTGATCAGCAGAGTAATCCTGATTACCAATATGTTGTTGCTGTGAATGGCATAGGGGACTGTAGTCCAAGAATAAATAGTTTAGGGCAGATCTTGACAAATGAAGTTGGTCCACCAGGAACAGATTTGAATTTTGCTCCAGACTTCCAGAAAATATTTCCAAATGCACCTTCTTCAGAGATCAAGGGTGGTGGTATTGCTATATATCCAAATGGATTTTTTAATGATTCTCAGAATCTGCAGAGGACCTCCAATCAACATCAACAGATTTCTTCTACTCCATTTCAGGGAGGAAATTTGAGCACAATTTTAACACAGTCTCGTGGTAATAACTCATGCCAGGAAAGTGCTACAAGCAGCTCATCCTTTATTACTGCCCAACTATCACCTGAGACGTCCAATGTAAGTGCTGCTGATAGCAGATACTCCCCACAAATGGCTGCAACTTTCCTAAGCGACAATCAACCCTGCCAACAAACTGATATTGGTCTGCCAGAGCAGTACTGTGGGAAGCTATTCAGAAATAATCCCGGGAAGGAATTTATGACTGCTTTGTTTGCTAATCAAAGTGACAGCTGTAATGATGAAATTTTGGGTGAAGGGTCCATGCATAAATCGGGAAATCCTCTTTCCAGCCTGGGTGAGTCAGTTAGTCCACAGTCTGGATCTAATTGCATTCCTGATTCTCTAAATGGGATACCTCATGCATTTTCTGATTCAAAGTTGCATGAGAGTGGATTTAAGTCTGGTTACTGCTCTCAAGAAGGGATTGGTCAATTTTCCTCATTGAACCTTTCAATGGCTCAGTTATCTTCTATGGTACCCTCTAGTGTTTCACAAAGGGACCCTATGGAAATCCAGCATGATCCTCTTCTCGTTTATCCACAAATACAAAGTAAGATGCCAATTGTGGAGCCAGGTGAGTCTCACGGAAGGCAGGATTTTCCAATTTCTTTACCGTCTACAGTATGTTTAGGAGTGAATGATCCTATTCAGAAGGATAGCATTTTATACAGTAAGAGGAATCCTTTAGCTCAAACTGATTTAACTGCATCTATCTTTATGGAGCGGCAGTGTGGGGACAATACTGTGAATATAGAAATCATGAAGAGAATGGAAGATGAAAATTCTCTTCAGAGTAAGGATAGCAATCTTTATGAGAGGGAATCACCTGCCATTGCTATGGAGCATGTGAATGAATTGCATCTTCTGGACTCTTCTCCAACATCTAATTTAAACACTAAGATTCATAAACAAAATCAGTTGGAGCAATCTTCTGAGGGTATGGTTTCTGCATCCTTTTGCTTGACAGGAATTTCCCAAAATAATCTGATTGAGATGACCCCATCAGATTTTCTTGCAATGAGCCACAGGACTAATGATGGAAGGGAATGTGGTTTTACTGAAGGTTTGAATGGTGAGCTAGGATTTGATTTTTCTTGGACCAGAAAATCTGGGTTTAATGCTTCATCTCTAAAATGCGAAGGAAACTCTAGTGGTAACACTTCTCAAAGTAATCATTTGTTCGAGCTGCCGATGGACCTGGTTTCTCATAAACAAGCACAAGTTCAACCTTTACGGAAGGATACAGATCTCTATGGAAATCCGACAGTAAGCTCAGGTTTTTTGTATTCTTCAGCACTTCATGATGACCCTGGTCCTAGTTCAAATTTGCCTGTGAATGAACTACAGAACTCAAGCAAGAATATTGTGTTTAAAAGAGTATCTTCTCTCATTGATGATGACCTTATAGCTAGTTCTAGTCAAATGGTTGATCAGTATAGTTGTGGAACTCTTGCCTGTGAAACAAGAGTTGAAGATATCATGTTGGAGCAATCAAAAATTTTTGAAAAGAGTGACAACTCAAATAAAATTGAGCCGCTTATTACTATAGAAGATGTGACCAATGTTGTTCCTCCAAGCATTGAGTCTTCATTGGCGCCCATCCAGCATATAGTCGTTGAAATTGGAAGTGATGTTTTATCCCCATCTGCGGCAGATTTGGAGAGCACTATTCCAGATTCTGAACTTGAGGATTTTAAAGATGAAGAAGGCAAGAATGAATCCCTTACCGATGCAAGGGTAGCAGAAATGGAAGCCAGCATCTACGGCTTGCAGATAATTCGAAATGCTGATCTCGAAGAACTTCGGGAGTTAGGATCTGGTACTTATGGAACTGTTTATCATGGAAAATGGAGGGGAACGGATGTTGCTATAAAGAGAATTAAAAAGAGCTGCTTTTTAGGAAGATCTTCTGAGCAAGAACGATTGACAAAAGACTTTTGGAGAGAGGCACAAATCCTCTCAAATCTCCACCACCCCAACGTGGTGGCTTTTTATGGGGTTGTACCAGACGGAGCTGGAGGAACCTTGGCAACTGTGACTGAGTATATGGTTAACGGTTCCCTTAGACATGTCCTTGTCAAGAAGGATAGATTACTTGATCGTCATAGAAAGCTAATAATTGCCATGGATGCAGCTTTTGGAATGGAATACTTGCATTCAAAGAATATTGTTCATTTTGATTTGAAATGTGACAATTTACTCGTCAATCTGAGGGATCCACTGCGACCCATATGTAAGGTTGGAGATTTTGGATTATCAAGAATTAAACGCAATACCCTGGTATCTGGTGGAGTGCGAGGAACCCTTCCTTGGATAGCACCAGAGCTGTTAAATGGCAGTAGCAACCAGGTTTCTGAGAAGGTTGATGTTTTCTCGTTTGGCATCTCTATGTGGGAGATATTGACTGGGGAGGAACCTTATGCAGATATGCATTGTGGCGCTATTATAGGGGGGATTGTAAAGAATACTCTCCGACCACCAATTCCACCACATTGTGACCCTGAATGGAGGAAGCTTATGGAAGAATGTTGGTCACCTGACCCTGATAGCCGACCATCTTTTACTGAGATAACGAGCCGACTCCGATCAATGTCTATGGCCCTTCAAGCTAAGCCTCATAATCAGGTGCGGTAG 3897 0.4129 MELNKPEILFVANPRRAPGVFTQYILAESASDVLKTGQDLHNDVLIQPGKEFSAEFGHEGIAHRREPAAPDSLRKHEVRFGFHGENGQVRYEDLTNILGSKRLDSENPFEIADLNFTREPTQEMENGAFVDKNSKSQKEDGNVTQGARKTLGESVGDQADTGAPGSPFLRKESSYSNEVSGLGASDDSQSGKIKLLCSFGGKVLPRPRDGKLRYVGGETRIISIRKDISWQGLLKKTLGICIQPHSIKYQLPGEDLDSLISVSSDEDLQNMIEEYHGPERHKGSQRLRIFLIPLSESEKELSFESRTDQQSNPDYQYVVAVNGIGDCSPRINSLGQILTNEVGPPGTDLNFAPDFQKIFPNAPSSEIKGGGIAIYPNGFFNDSQNLQRTSNQHQQISSTPFQGGNLSTILTQSRGNNSCQESATSSSSFITAQLSPETSNVSAADSRYSPQMAATFLSDNQPCQQTDIGLPEQYCGKLFRNNPGKEFMTALFANQSDSCNDEILGEGSMHKSGNPLSSLGESVSPQSGSNCIPDSLNGIPHAFSDSKLHESGFKSGYCSQEGIGQFSSLNLSMAQLSSMVPSSVSQRDPMEIQHDPLLVYPQIQSKMPIVEPGESHGRQDFPISLPSTVCLGVNDPIQKDSILYSKRNPLAQTDLTASIFMERQCGDNTVNIEIMKRMEDENSLQSKDSNLYERESPAIAMEHVNELHLLDSSPTSNLNTKIHKQNQLEQSSEGMVSASFCLTGISQNNLIEMTPSDFLAMSHRTNDGRECGFTEGLNGELGFDFSWTRKSGFNASSLKCEGNSSGNTSQSNHLFELPMDLVSHKQAQVQPLRKDTDLYGNPTVSSGFLYSSALHDDPGPSSNLPVNELQNSSKNIVFKRVSSLIDDDLIASSSQMVDQYSCGTLACETRVEDIMLEQSKIFEKSDNSNKIEPLITIEDVTNVVPPSIESSLAPIQHIVVEIGSDVLSPSAADLESTIPDSELEDFKDEEGKNESLTDARVAEMEASIYGLQIIRNADLEELRELGSGTYGTVYHGKWRGTDVAIKRIKKSCFLGRSSEQERLTKDFWREAQILSNLHHPNVVAFYGVVPDGAGGTLATVTEYMVNGSLRHVLVKKDRLLDRHRKLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPLRPICKVGDFGLSRIKRNTLVSGGVRGTLPWIAPELLNGSSNQVSEKVDVFSFGISMWEILTGEEPYADMHCGAIIGGIVKNTLRPPIPPHCDPEWRKLMEECWSPDPDSRPSFTEITSRLRSMSMALQAKPHNQVR 1298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2588 1298 MobiDBLite consensus disorder prediction 170 187 - -
Prci13g2588 1298 Pfam PB1 domain 208 291 IPR000270 GO:0005515
Prci13g2588 1298 MobiDBLite consensus disorder prediction 511 527 - -
Prci13g2588 1298 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 212 294 - -
Prci13g2588 1298 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1012 1106 - -
Prci13g2588 1298 Gene3D Phosphorylase Kinase; domain 1 1012 1106 - -
Prci13g2588 1298 PRINTS Tyrosine kinase catalytic domain signature 1209 1231 IPR001245 GO:0004672|GO:0006468
Prci13g2588 1298 PRINTS Tyrosine kinase catalytic domain signature 1253 1275 IPR001245 GO:0004672|GO:0006468
Prci13g2588 1298 PRINTS Tyrosine kinase catalytic domain signature 1101 1114 IPR001245 GO:0004672|GO:0006468
Prci13g2588 1298 PRINTS Tyrosine kinase catalytic domain signature 1138 1156 IPR001245 GO:0004672|GO:0006468
Prci13g2588 1298 PANTHER SERINE-THREONINE PROTEIN KINASE 248 1285 - -
Prci13g2588 1298 SMART PB1_new 207 294 IPR000270 GO:0005515
Prci13g2588 1298 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1144 1156 IPR008271 GO:0004672|GO:0006468
Prci13g2588 1298 Gene3D - 211 293 - -
Prci13g2588 1298 ProSiteProfiles Protein kinase domain profile. 1019 1289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2588 1298 CDD STKc_MAP3K-like 1025 1282 - -
Prci13g2588 1298 MobiDBLite consensus disorder prediction 149 189 - -
Prci13g2588 1298 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1107 1298 - -
Prci13g2588 1298 SUPERFAMILY CAD & PB1 domains 209 294 - -
Prci13g2588 1298 MobiDBLite consensus disorder prediction 506 527 - -
Prci13g2588 1298 SMART serkin_6 1019 1288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2588 1298 Gene3D Transferase(Phosphotransferase) domain 1 1107 1297 - -
Prci13g2588 1298 MobiDBLite consensus disorder prediction 125 144 - -
Prci13g2588 1298 SUPERFAMILY Protein kinase-like (PK-like) 1008 1281 IPR011009 -
Prci13g2588 1298 CDD PB1_UP2 196 292 - -
Prci13g2588 1298 Pfam Protein tyrosine and serine/threonine kinase 1020 1282 IPR001245 GO:0004672|GO:0006468
Prci13g2588 1298 ProSitePatterns Protein kinases ATP-binding region signature. 1025 1050 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2588 Prci-Chr13 39978351 39987970 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2588 190 333 MAP Kinase Kinase Kinase AT1G16270 59.028 1.28e-41 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Prci13g2588 PK_Tyr_Ser-Thr 8.5e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2588 - - gmx:100790135 1361.67