Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2587 ATGGAACTAAATAAGCCGGAAATTTTGTTCGTTGCCAACCCTAGAAGGGCTCCAGGTGTGTTTACTCAATACATACTTGCAGAATCAGCAAGCGATGTTTTAAAAACAGGTCAGGATTTACATAATGACGTCTTAATACAGCCGGGGAAAGAATTTTCTGCAGAGTTTGGACATGAAGGAATTGCTCATAGAAGAGAACCTGCTGCCCCTGATTCACTTCGAAAGCATGAAGTTAGGTTTGGATTTCACGGGGAGAATGGCCAAGTGAGATATGAGGATCTTACTAATATTCTGGGATCGAAGAGACTGGACTCTGAGAATCCTTTTGAGATTGCTGATCTTAACTTCACAAGAGAGCCAACTCAAGAGATGGAAAATGGGGCTTTCGTTGATAAAAATAGCAAAAGTCAAAAGGAAGATGGTAATGTAACACAAGGAGCGAGGAAGACTCTTGGTGAATCAGTTGGTGACCAAGCTGATACCGGAGCACCTGGGTCTCCCTTCCTTAGAAAAGAATCCTCCTATTCCAATGAAGTTTCTGGTTTAGGAGCGTCAGATGATTCTCAATCTGGAAAAATCAAATTGCTGTGCAGCTTTGGTGGAAAAGTATTACCAAGGCCCAGGGATGGGAAACTCAGATATGTAGGGGGAGAGACTCGCATTATATCTATCCGAAAGGATATTTCATGGCAAGGGCTTCTTAAGAAGACCCTGGGTATTTGCATTCAGCCTCACTCAATTAAGTACCAGCTTCCAGGTGAGGATCTTGATTCTCTAATATCTGTCTCCTCTGATGAGGATCTTCAAAATATGATAGAAGAATACCATGGGCCTGAAAGGCATAAGGGATCTCAAAGACTTCGAATTTTCTTAATTCCCTTGAGTGAATCTGAAAAGGAATTGTCATTTGAATCAAGAACTGATCAGCAGAGTAATCCTGATTACCAATATGTTGTTGCTGTGAATGGCATAGGGGACTGTAGTCCAAGAATAAATAGTTTAGGGCAGATCTTGACAAATGAAGTTGGTCCACCAGGAACAGATTTGAATTTTGCTCCAGACTTCCAGAAAATATTTCCAAATGCACCTTCTTCAGAGATCAAGGGTGGTGGTATTGCTATATATCCAAATGGATTTTTTAATGATTCTCAGAATCTGCAGAGGACCTCCAATCAACATCAACAGATTTCTTCTACTCCATTTCAGGGAGGAAATTTGAGCACAATTTTAACACAGTCTCGTGGTAATAACTCATGCCAGGAAAGTGCTACAAGCAGCTCATCCTTTATTACTGCCCAACTATCACCTGAGACGTCCAATGTAAGTGCTGCTGATAGCAGATACTCCCCACAAATGGCTGCAACTTTCCTAAGCGACAATCAACCCTGCCAACAAACTGATATTGGTCTGCCAGAGCAGTACTGTGGGAAGCTATTCAGAAATAATCCCGGGAAGGAATTTATGACTGCTTTGTTTGCTAATCAAAGTGACAGCTGTAATGATGAAATTTTGGGTGAAGGGTCCATGCATAAATCGGGAAATCCTCTTTCCAGCCTGGGTGAGTCAGTTAGTCCACAGTCTGGATCTAATTGCATTCCTGATTCTCTAAATGGGATACCTCATGCATTTTCTGATTCAAAGTTGCATGAGAGTGGATTTAAGTCTGGTTACTGCTCTCAAGAAGGGATTGGTCAATTTTCCTCATTGAACCTTTCAATGGCTCAGTTATCTTCTATGGTACCCTCTAGTGTTTCACAAAGGGACCCTATGGAAATCCAGCATGATCCTCTTCTCGTTTATCCACAAATACAAAGTAAGATGCCAATTGTGGAGCCAGGTGAGTCTCACGGAAGGCAGGATTTTCCAATTTCTTTACCGTCTACAGTATGTTTAGGAGTGAATGATCCTATTCAGAAGGATAGCATTTTATACAGTAAGAGGAATCCTTTAGCTCAAACTGATTTAACTGCATCTATCTTTATGGAGCGGCAGTGTGGGGACAATACTGTGAATATAGAAATCATGAAGAGAATGGAAGATGAAAATTCTCTTCAGAGTAAGGATAGCAATCTTTATGAGAGGGAATCACCTGCCATTGCTATGGAGCATGTGAATGAATTGCATCTTCTGGACTCTTCTCCAACATCTAATTTAAACACTAAGATTCATAAACAAAATCAGTTGGAGCAATCTTCTGAGGGTATGGTTTCTGCATCCTTTTGCTTGACAGGAATTTCCCAAAATAATCTGATTGAGATGACCCCATCAGATTTTCTTGCAATGAGCCACAGGACTAATGATGGAAGGGAATGTGGTTTTACTGAAGGTTTGAATGGTGAGCTAGGATTTGATTTTTCTTGGACCAGAAAATCTGGGTTTAATGCTTCATCTCTAAAATGCGAAGGAAACTCTAGTGGTAACACTTCTCAAAGTAATCATTTGTTCGAGCTGCCGATGGACCTGGTTTCTCATAAACAAGCACAAGTTCAACCTTTACGGAAGGATACAGATCTCTATGGAAATCCGACAGTAAGCTCAGGTTTTTTGTATTCTTCAGCACTTCATGATGACCCTGGTCCTAGTTCAAATTTGCCTGTGAATGAACTACAGAACTCAAGCAAGAATATTGTGTTTAAAAGAGTATCTTCTCTCATTGATGATGACCTTATAGCTAGTTCTAGTCAAATGGTTGATCAGTATAGTTGTGGAACTCTTGCCTGTGAAACAAGAGTTGAAGATATCATGTTGGAGCAATCAAAAATTTTTGAAAAGAGTGACAACTCAAATAAAATTGAGCCGCTTATTACTATAGAAGATGTGACCAATGTTGTTCCTCCAAGCATTGAGTCTTCATTGGCGCCCATCCAGCATATAGTCGTTGAAATTGGAAGTGATGTTTTATCCCCATCTGCGGCAGATTTGGAGAGCACTATTCCAGATTCTGAACTTGAGGATTTTAAAGATGAAGAAGGCAAGAATGAATCCCTTACCGATGCAAGGGTAGCAGAAATGGAAGCCAGCATCTACGGCTTGCAGATAATTCGAAATGCTGATCTCGAAGAACTTCGGGAGTTAGGATCTGGTACTTATGGAACTGTTTATCATGGAAAATGGAGGGGAACGGATGTTGCTATAAAGAGAATTAAAAAGAGCTGCTTTTTAGGAAGATCTTCTGAGCAAGAACGATTGACAAAAGACTTTTGGAGAGAGGCACAAATCCTCTCAAATCTCCACCACCCCAACGTGGTGGCTTTTTATGGGGTTGTACCAGACGGAGCTGGAGGAACCTTGGCAACTGTGACTGAGTATATGGTTAACGGTTCCCTTAGACATGTCCTTGTCAAGAAGGATAGATTACTTGATCGTCATAGAAAGCTAATAATTGCCATGGATGCAGCTTTTGGAATGGAATACTTGCATTCAAAGAATATTGTTCATTTTGATTTGAAATGTGACAATTTACTCGTCAATCTGAGGGATCCACTGCGACCCATATGTAAGGTTGGAGATTTTGGATTATCAAGAATTAAACGCAATACCCTGGTATCTGGTGGAGTGCGAGGAACCCTTCCTTGGATAGCACCAGAGCTGTTAAATGGCAGTAGCAACCAGGTTTCTGAGAAGGTTGATGTTTTCTCGTTTGGCATCTCTATGTGGGAGATATTGACTGGGGAGGAACCTTATGCAGATATGCATTGTGGCGCTATTATAGTTAATCATACTCAAGCAGTGGTGGAGTGA 3741 0.4092 MELNKPEILFVANPRRAPGVFTQYILAESASDVLKTGQDLHNDVLIQPGKEFSAEFGHEGIAHRREPAAPDSLRKHEVRFGFHGENGQVRYEDLTNILGSKRLDSENPFEIADLNFTREPTQEMENGAFVDKNSKSQKEDGNVTQGARKTLGESVGDQADTGAPGSPFLRKESSYSNEVSGLGASDDSQSGKIKLLCSFGGKVLPRPRDGKLRYVGGETRIISIRKDISWQGLLKKTLGICIQPHSIKYQLPGEDLDSLISVSSDEDLQNMIEEYHGPERHKGSQRLRIFLIPLSESEKELSFESRTDQQSNPDYQYVVAVNGIGDCSPRINSLGQILTNEVGPPGTDLNFAPDFQKIFPNAPSSEIKGGGIAIYPNGFFNDSQNLQRTSNQHQQISSTPFQGGNLSTILTQSRGNNSCQESATSSSSFITAQLSPETSNVSAADSRYSPQMAATFLSDNQPCQQTDIGLPEQYCGKLFRNNPGKEFMTALFANQSDSCNDEILGEGSMHKSGNPLSSLGESVSPQSGSNCIPDSLNGIPHAFSDSKLHESGFKSGYCSQEGIGQFSSLNLSMAQLSSMVPSSVSQRDPMEIQHDPLLVYPQIQSKMPIVEPGESHGRQDFPISLPSTVCLGVNDPIQKDSILYSKRNPLAQTDLTASIFMERQCGDNTVNIEIMKRMEDENSLQSKDSNLYERESPAIAMEHVNELHLLDSSPTSNLNTKIHKQNQLEQSSEGMVSASFCLTGISQNNLIEMTPSDFLAMSHRTNDGRECGFTEGLNGELGFDFSWTRKSGFNASSLKCEGNSSGNTSQSNHLFELPMDLVSHKQAQVQPLRKDTDLYGNPTVSSGFLYSSALHDDPGPSSNLPVNELQNSSKNIVFKRVSSLIDDDLIASSSQMVDQYSCGTLACETRVEDIMLEQSKIFEKSDNSNKIEPLITIEDVTNVVPPSIESSLAPIQHIVVEIGSDVLSPSAADLESTIPDSELEDFKDEEGKNESLTDARVAEMEASIYGLQIIRNADLEELRELGSGTYGTVYHGKWRGTDVAIKRIKKSCFLGRSSEQERLTKDFWREAQILSNLHHPNVVAFYGVVPDGAGGTLATVTEYMVNGSLRHVLVKKDRLLDRHRKLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPLRPICKVGDFGLSRIKRNTLVSGGVRGTLPWIAPELLNGSSNQVSEKVDVFSFGISMWEILTGEEPYADMHCGAIIVNHTQAVVE 1246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2587 1246 SUPERFAMILY Protein kinase-like (PK-like) 1007 1240 IPR011009 -
Prci13g2587 1246 MobiDBLite consensus disorder prediction 170 187 - -
Prci13g2587 1246 MobiDBLite consensus disorder prediction 511 527 - -
Prci13g2587 1246 SMART serkin_6 1019 1245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2587 1246 PANTHER SERINE-THREONINE PROTEIN KINASE 259 1236 - -
Prci13g2587 1246 Pfam PB1 domain 208 291 IPR000270 GO:0005515
Prci13g2587 1246 SMART PB1_new 207 294 IPR000270 GO:0005515
Prci13g2587 1246 CDD STKc_MAP3K-like 1025 1238 - -
Prci13g2587 1246 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1144 1156 IPR008271 GO:0004672|GO:0006468
Prci13g2587 1246 MobiDBLite consensus disorder prediction 149 189 - -
Prci13g2587 1246 SUPERFAMILY CAD & PB1 domains 209 294 - -
Prci13g2587 1246 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1012 1106 - -
Prci13g2587 1246 Pfam Protein tyrosine and serine/threonine kinase 1020 1233 IPR001245 GO:0004672|GO:0006468
Prci13g2587 1246 MobiDBLite consensus disorder prediction 506 527 - -
Prci13g2587 1246 Gene3D Transferase(Phosphotransferase) domain 1 1000 1244 - -
Prci13g2587 1246 ProSiteProfiles Protein kinase domain profile. 1019 1246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2587 1246 Gene3D - 211 293 - -
Prci13g2587 1246 MobiDBLite consensus disorder prediction 125 144 - -
Prci13g2587 1246 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 212 294 - -
Prci13g2587 1246 CDD PB1_UP2 196 292 - -
Prci13g2587 1246 ProSitePatterns Protein kinases ATP-binding region signature. 1025 1050 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2587 Prci-Chr13 39978345 39987319 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2587 190 333 MAP Kinase Kinase Kinase AT1G16270 59.028 1.29e-41 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Prci13g2587 PK_Tyr_Ser-Thr 7.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2587 - - gmx:100790135 1258.43