Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2585 ATGGACATGGAAGATGAGGAAAAGGCAGTCCGAAGGGTGGGAGAAGGAGGAGGAGAAGAATGTCGAGTTTTCCAATGCCAGTTCTGTTCAAGAAAGTTCTACAGCTCTCAAGCTTTGGGAGGACACCAAAATGCCCACAAAAAAGAGAGAACGGCTGCCAGAAAGGCTAAAAGGGCATCGGAGTGCTCCTCTGCTTGCCCTCCCCTGTTCCTCGCTTCTCACGCTTCAAGTCTTCACTACTTCCAACCCCATCAGATTTTTTACCCTTTCAGACCCAACGCTGCACCTACATTCGGCGGCAATTCTCTGTTTTGTGAAGATGTTGGCGACAGAGGCTTGGGGAATTGGCACAGCAACATGTCACTCACAAGCGACGACCACAGCATTGGCATCTTGAATCGTTGTCAAGAGAAAGATCAAAATCTTGATTTGACTCTGCGTCTATAG 447 0.4855 MDMEDEEKAVRRVGEGGGEECRVFQCQFCSRKFYSSQALGGHQNAHKKERTAARKAKRASECSSACPPLFLASHASSLHYFQPHQIFYPFRPNAAPTFGGNSLFCEDVGDRGLGNWHSNMSLTSDDHSIGILNRCQEKDQNLDLTLRL 148
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2585 148 ProSitePatterns Zinc finger C2H2 type domain signature. 26 46 IPR013087 -
Prci13g2585 148 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 12 72 IPR044246 GO:0009788
Prci13g2585 148 Gene3D Classic Zinc Finger 4 67 - -
Prci13g2585 148 ProSiteProfiles Zinc finger C2H2 type domain profile. 24 51 IPR013087 -
Prci13g2585 148 SUPERFAMILY beta-beta-alpha zinc fingers 22 51 IPR036236 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Prci13g2585 Prci-Chr13 39941004 39941450 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2585 22 58 C2H2 Transcription Factor Family AT1G66140 75.676 2.49e-14 66.2
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci13g2585 None None None
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2585 - - pcin:129290111 301.212