Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci13g2585 | ATGGACATGGAAGATGAGGAAAAGGCAGTCCGAAGGGTGGGAGAAGGAGGAGGAGAAGAATGTCGAGTTTTCCAATGCCAGTTCTGTTCAAGAAAGTTCTACAGCTCTCAAGCTTTGGGAGGACACCAAAATGCCCACAAAAAAGAGAGAACGGCTGCCAGAAAGGCTAAAAGGGCATCGGAGTGCTCCTCTGCTTGCCCTCCCCTGTTCCTCGCTTCTCACGCTTCAAGTCTTCACTACTTCCAACCCCATCAGATTTTTTACCCTTTCAGACCCAACGCTGCACCTACATTCGGCGGCAATTCTCTGTTTTGTGAAGATGTTGGCGACAGAGGCTTGGGGAATTGGCACAGCAACATGTCACTCACAAGCGACGACCACAGCATTGGCATCTTGAATCGTTGTCAAGAGAAAGATCAAAATCTTGATTTGACTCTGCGTCTATAG | 447 | 0.4855 | MDMEDEEKAVRRVGEGGGEECRVFQCQFCSRKFYSSQALGGHQNAHKKERTAARKAKRASECSSACPPLFLASHASSLHYFQPHQIFYPFRPNAAPTFGGNSLFCEDVGDRGLGNWHSNMSLTSDDHSIGILNRCQEKDQNLDLTLRL | 148 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci13g2585 | 148 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 26 | 46 | IPR013087 | - | |
Prci13g2585 | 148 | PANTHER | C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN | 12 | 72 | IPR044246 | GO:0009788 | |
Prci13g2585 | 148 | Gene3D | Classic Zinc Finger | 4 | 67 | - | - | |
Prci13g2585 | 148 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 24 | 51 | IPR013087 | - | |
Prci13g2585 | 148 | SUPERFAMILY | beta-beta-alpha zinc fingers | 22 | 51 | IPR036236 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci13g2585 | Prci-Chr13 | 39941004 | 39941450 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci13g2585 | 22 | 58 | C2H2 Transcription Factor Family | AT1G66140 | 75.676 | 2.49e-14 | 66.2 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Prci13g2585 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci13g2585 | - | - | pcin:129290111 | 301.212 |