Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2583 ATGGCGTTCATGAAGCTTTTCACTATCTATGCTTTCATGTCCTGCTACACTTTATCTCTCTCTTCCTCTGCCTCCTCTGACGTTGAACTTCTCTTGGGGAAAATCAAAGCATCCTTACAAGGTAGCTCCCAGAATATCATCTTGTCTTCTTGGAACTCCTCTGTGCCTCTTTGCCAATGGAGGGGTCTCAAGTGGGTCTTCTCCAATGCCTCTTCTCTCCCCTGCACCGACCTTTCTTCTCCTCATTGGACCAATCCGTCACTCTTCAAAGACCCTCATCTTCGTTTGCTCTCTCTTCAGCTTCCTTCCGCTAATCTCTCCGGTTCCATCCCCAGAGAGATTTCTGAGCTCCCTATGCTTCAGAGCCTCTATCTCAACTTCAATTCTTTGAAAGGACCAATTCCTCTTGAACTTGGCTATACTTCCTCCCTCTCCGAAATCGATGTGCGTGAAAATTTTCTAAGCGGAATTTTGCCTCCGTCCATCTGGAATATGTGCGATAGGCTTGTTTCTCTCAGACTCCATGGAAATTTGCTTTCCGGTTCTATTCCAGAACCAGCATTGCCGAATTGTACTTACGACACTTTGCGATTTCTTGATTTGGGCGAGAACAACTTTTCTGGGAATTTCCCAGACTTCATTACTCGTTTTGGTGGGTTGAAACAGCTTGACTTGGGGAATAATATGTTTGTGGGTTCGATTCCTCAGAGCTTGGAGGGGCTGAGGCTTGAGAAATTGAACCTTTCCCACAATAATTTTAGTGGAGTTTTGCCTGCTTTTCTGGAACCCAAGTTTGGTGTGGAGGTTTTTGAAGGGAATAACCCGGACTTGTGTGGTCCGCCCTTGAGAAGATGTGGTGGAAATTCTAATCCTAGACTAAGTGCTGGTGCTATGGCCGGCATAGTTATCAGTCTGATGGCAGGAAGTGTGGTTTTAGCTTCTCTGCTTATAGGGTATGTGCAAAACAAGAAGAAGAAGGGCAGAGGAGAGAGTGAGGATGAATTGGAGGAAGAAGAAGACGTGGAAAATGGTGATGATAGTAATGGTAGTGGTGGTAGTGGTGAGAACAAGCTTATGTTATTTCAAGGTGGCGAGAATTTGACCTTAGACGATGTGTTGAACGCAAATGGGCAAGTTGTGGAGAAGACGTGTTATGGGACTGTGTATAAGGCAAAGCTTGCTGATGGTGGGACCATTGCTTTGAGGTTGTTGAGAGAAGGTTGCTGCAAGGACAGGGCTTCAAGCTTGCCGGTTGTAAAGCAACTAGGAAAAATTCGCCATGAGAATTTGATTCCTTTAAGAGCTTTCTATCAAGGGAAGAGAGGGGAGAAGCTCCTTATTTTTGATTATCTGCCTCTTAGAACCCTGCATGATCTTCTACATGAAACTAAAGCCGGAAAACCAGTGTTAAACTGGGTCAGGCGACACAAGATTGCATTGGGTATAGCTAGAGGGCTTGCATGTCTTCACACAGGGCTTGATTCTCCAATTACTCATGGGTGTGTCAAATCAAAGAACGTTGTTGTGGATGAATTCTTTGTTGGCAGGCTCACTGAGTTTGGGCTTGATAAGCTATTGGTTCCAGCAGCAGCAGATGAAATGGTGGCACTTGCTAAGTCTGAGGGCTATAAGGCTCCAGAGCTTCAAAGGATGAATAAATGTAATTCAAGAACAGATGTTTATGCATTCGGCATATTGCTGTTGGAGATTTTGATTGGGAAGAAACCTGGAAAAAGTGCGAGAGGAAGTGAGTTTGTAGATTTGCCTTCTATGGTGAAAGTGGCAGTTTTAGAGGAGACAACAATGGAAGTGTTTGATGTGGAGATATTGAAAGGGATAAGAAGTCCTATGGAAGAAGGGTTGATTCAAGCTTTGAAGCTAGCAATGGGTTGTTGTGCCCCTGTGGCTTCAGTTAGACCCAGCATGGATGAAGTTGTGAGGCAGCTGGAGGAGAACAGACCAAGAAACAGATCTGCTTTATACAGCCCCACAGAAACTAGAAGTGGAAGTGGTACCCCATTTTGA 2025 0.4484 MAFMKLFTIYAFMSCYTLSLSSSASSDVELLLGKIKASLQGSSQNIILSSWNSSVPLCQWRGLKWVFSNASSLPCTDLSSPHWTNPSLFKDPHLRLLSLQLPSANLSGSIPREISELPMLQSLYLNFNSLKGPIPLELGYTSSLSEIDVRENFLSGILPPSIWNMCDRLVSLRLHGNLLSGSIPEPALPNCTYDTLRFLDLGENNFSGNFPDFITRFGGLKQLDLGNNMFVGSIPQSLEGLRLEKLNLSHNNFSGVLPAFLEPKFGVEVFEGNNPDLCGPPLRRCGGNSNPRLSAGAMAGIVISLMAGSVVLASLLIGYVQNKKKKGRGESEDELEEEEDVENGDDSNGSGGSGENKLMLFQGGENLTLDDVLNANGQVVEKTCYGTVYKAKLADGGTIALRLLREGCCKDRASSLPVVKQLGKIRHENLIPLRAFYQGKRGEKLLIFDYLPLRTLHDLLHETKAGKPVLNWVRRHKIALGIARGLACLHTGLDSPITHGCVKSKNVVVDEFFVGRLTEFGLDKLLVPAAADEMVALAKSEGYKAPELQRMNKCNSRTDVYAFGILLLEILIGKKPGKSARGSEFVDLPSMVKVAVLEETTMEVFDVEILKGIRSPMEEGLIQALKLAMGCCAPVASVRPSMDEVVRQLEENRPRNRSALYSPTETRSGSGTPF 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2583 674 Pfam Leucine rich repeat 195 253 IPR001611 GO:0005515
Prci13g2583 674 Pfam Protein tyrosine and serine/threonine kinase 379 649 IPR001245 GO:0004672|GO:0006468
Prci13g2583 674 FunFam Leucine-rich repeat receptor-like protein kinase 193 285 - -
Prci13g2583 674 MobiDBLite consensus disorder prediction 327 355 - -
Prci13g2583 674 ProSiteProfiles Protein kinase domain profile. 374 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2583 674 MobiDBLite consensus disorder prediction 655 674 - -
Prci13g2583 674 Gene3D Ribonuclease Inhibitor 191 286 IPR032675 -
Prci13g2583 674 Gene3D Phosphorylase Kinase; domain 1 372 450 - -
Prci13g2583 674 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 18 187 IPR046959 -
Prci13g2583 674 MobiDBLite consensus disorder prediction 653 674 - -
Prci13g2583 674 SUPERFAMILY L domain-like 58 265 - -
Prci13g2583 674 SUPERFAMILY Protein kinase-like (PK-like) 380 650 IPR011009 -
Prci13g2583 674 Gene3D Transferase(Phosphotransferase) domain 1 453 662 - -
Prci13g2583 674 Gene3D Ribonuclease Inhibitor 26 190 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2583 Prci-Chr13 39923299 39926926 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2583 6 674 Receptor kinase-like Gene Family AT3G24660 70.448 0.0 892
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci13g2583 PK_Tyr_Ser-Thr 3.5e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2583 - - jre:109006053 1025.39