Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2582 ATGTCGAGGCAGCAATCTTTCACGCTTCTTCATCTTCCCTCCTTCTTCAACCTTCTTTTTCTGCTTCTTCCTCATCTTTCGTCTTCTTCAAACAATGAAGGTCAAGTTCTACTTTCATGGCTCCACTCCTCCTCCTCCTCCTCTGTTCCTCCTTCGTCTTTTTCCAATTGGAACCCTTCAAACCCCAACCCTTGTAACTGGTCTTTCATCAAATGCTCTTCACAAAACCTTGTCACGGAGATAAACATTCAAGCAACAGAATTAGCGCTTCCTTTTCCTCCTAACATTTCATCTTTTCCCTTTCTTCAGAAACTTGTCATTTCAGGGGCTAACCTTTCTGGGTTTATCTCACCTGATATTGGACACTGCTCTCAGCTTATAACCATTGACCTTAGCTCAAATAATCTTGTCGGTGTCGTTCCTTCCAGCATCGGCAATCTAAAAAACCTCCAAAGTTTGAGCTTGAACTCTAACCAGCTTTCTGGGGAAATACCCAAAGAGCTTGGTGATTGTGTTAGTTTGAAGAACCTTAATATTTTAGATAATAATCTTAGTGGAGTTCTTCCTGTTGAGCTGGGAAAGCTTTCAAATCTCGTGGTTATAAGAGCTGGAGGAAACAATGGCATTGTGGGGAGGATTCCTGATGCTCTTGGGGATTGCAGTAACTTGACTATATTAGGTCTGGCTGACACTAAAATCTCCGGTTCATTACCTGCTTCTTTGGGTAAGTTAAGGCTGCTCCAAACAATTTCTATTTATAATACTATGTTGTCTGGTGAGATTCCTCCTGAAATAGGAAATTGCTCTGAGCTTGTGAACTTGTTTTTGTACGAGAATGAGCTACTCGGTTCATTGCCAAAAGAGCTGGGAAAGCTTCAAAAACTAGAGAAAATGTTGTTATGGCAGAATAAATTTGTGGGAAGCATACCTCAGGAAATTGGTAACTGTTGGAACTTGAAGATCCTTGATGTTTCTTTAAACTCCTTGTCTGGAACGATACCTATTACTTTTGGAAACCTCTCGAATCTTGAAGAACTTATGCTAAGTAACAATAACTTGTCTGGTTCCATCCCGCCTGTTCTTTCCAATCTTTCGAACCTCATACAGCTTCAGGTAGATACTAATCAGATATCAGGGTCAATTCCGGTTGAACTTGGAAAGTTGAAGAAGCTTACTGTCTTTTTCGCTTGGCAAAATAAACTTGAAGGAAGCATTCCTTCTGAATTGGGTAGTTGTGCCAGCCTAGAAGCTCTTGATTTGTCATATAATTCACTCACTGATAGCTTACCTCCTAGCTTATTTCAGCTTCAAAATCTGACTAAGCTTCTGCTAATCTCTAACCATCTTTCTGGGCCTATGCCCCAGGAAATTGGTAATTGTAGTTCTCTCATTCGACTTCGACTTTTGAACAACAAAATTGGTGGAGAGATTCCAAGAGAACTTGGCTTTCTCAATAACCTAAACTTCCTCGATCTGTCAGAGAATAATCTTACTGGCTTAGTGCCAGTTGAGTTAGGAAATTGCAAAGAACTGCAAATGTTGAACCTTAGCAATAACTCCCTTTCTGGTGTTTTACCTAGTTCTCTATCTTCGCTCACAAGGCTTGAGGTTTTAGATGTTTCTCTGAATCATTTCTCTGGTGAAATTCCAGTGAGTGTTGGCCAACTCACTTCACTTATTAGGCTTATCCTTAGCAAAAACTCATTGTCTGGATCAATACCCTCGTCACTTGGCCTTTGTTCAAGTCTTCAATTGCTAGATCTAAGTAGCAATAATCTCTCAGGAAGAATCCCGTCAGAACTTTTTGATATAGAAGCACTTGACATTACTTTGAATTTGAGTCACAATGCATTATCTGGAGTAATCCCACCGCAGGTTTCTTCTCTGAACAAACTTTCTGCTCTAGACCTTTCCCACAACAAGCTTGAAGGAGATTTGGTGGCACTTTCAGGACTTGAAAATCTTGTTTCTCTCAACATCTCCTTCAACATTTTCACTGGTTATCTTCCGGACATCAAGTTATTCCACCAATTGTCACCAACAGATTTGGAAGGAAATCATGGCTTGTGTCCAAGTGGCCGAGACTCGTGCTTCATTAGCAATTCTGCAATGACAAAAATACACAATAATAGTGATTCTAATAAGGCTAGGAGAATGAAATTGTGCCTAGGATTGCTAAGTGCCTTCACCATTGCAATGGCAATCTTTGGAATTCTTACAGTGTATCGAGCAAAGAAAAGGGCTCAAGATGACAATAATTCTGAGATGGGAGGGGATTCATGGCCTTGGCAGTTCACGCCATTTCAAAAATTAAACTTCACTATCGATCAGGTCCTAAAATGTCTGGTTGACTCTAATGTGATTGGAAAAGGATGTTCTGGGGTCGTTTATCGTGCAGAACTAGAAAATGGTGATGTCATTGCTGTGAAAAAACTATGGCCAACAACATTGGGTACTGGATATGATCGGCAAAATGACAAGCTAGCAGTTCATGGAGGAGGAGTTCGTGATTCCTTCTCAGCTGAGGTTAAAACCTTGGGTTCCATTCGACACAAGAACATTGTGAGGTTCCTCGGTTGCTGTTGGAACCGAAATACTAGGCTACTCATGTATGACTACATGCCAAATGGGAGCCTGGGAAGTTTGCTTCATGAACGAAGTGGTGGAAACTGCTTGGACTGGGACATCAGGTATCGGATATTGCTGGGAGCAGCTCAAGGCTTGGCTTATCTTCACCATGATTGTGTTCCTCCCATTGTTCATAGGGACATCAAGGCCAACAATATTCTCATAGGTCCTCATTTTGAGCCATACATTGCTGATTTTGGGCTTGCTAAACTTGTTGATGATGGAGATTTCGCAAGATCCTCTAGCACACTGGCCGGCTCCTATGGCTATATCGCTCCTGAATATGGATACATGATGAAGATAACAGAGAAAAGTGACGTGTACAGTTATGGGATTGTTGTATTAGAAGTGCTAACAGGGAAGCAACCAATTGACCCAACAATACCAGACGGGCTCCACATTGTTGACTGGGTCAGACAGAAAAGAGGAGGAAGTGAAGTGCTAGACCCAAGCCTATGTGCAAGGCCTGAACCCGAAATAGAAGAAATATTGCAGACTTTGGGGGTGGCTTTGTTGTGTGTGAATCCAGGGCCAGAAGATAGGCCAACCATGAAAGATGTAGCTGCAATGCTTAAAGAGATCAGGCAGGAAAGGGAGGAATATATGAAAGTTGATGTGCTTCTTCACGGATCTTCTGCAAATGAAGAAGATAACAATAATAATAATAGTTCAAGTGATCAAGACCCAAGAGGGAATACGATGAAGCACTCATACCCAATAAACAGCAACAACACTAGTTTTTCTGCCTCTCTGTTTGTCTCTCCTTCGTCCTCCAATACGGAAGTCGCATTCAAATAG 3426 0.4154 MSRQQSFTLLHLPSFFNLLFLLLPHLSSSSNNEGQVLLSWLHSSSSSSVPPSSFSNWNPSNPNPCNWSFIKCSSQNLVTEINIQATELALPFPPNISSFPFLQKLVISGANLSGFISPDIGHCSQLITIDLSSNNLVGVVPSSIGNLKNLQSLSLNSNQLSGEIPKELGDCVSLKNLNILDNNLSGVLPVELGKLSNLVVIRAGGNNGIVGRIPDALGDCSNLTILGLADTKISGSLPASLGKLRLLQTISIYNTMLSGEIPPEIGNCSELVNLFLYENELLGSLPKELGKLQKLEKMLLWQNKFVGSIPQEIGNCWNLKILDVSLNSLSGTIPITFGNLSNLEELMLSNNNLSGSIPPVLSNLSNLIQLQVDTNQISGSIPVELGKLKKLTVFFAWQNKLEGSIPSELGSCASLEALDLSYNSLTDSLPPSLFQLQNLTKLLLISNHLSGPMPQEIGNCSSLIRLRLLNNKIGGEIPRELGFLNNLNFLDLSENNLTGLVPVELGNCKELQMLNLSNNSLSGVLPSSLSSLTRLEVLDVSLNHFSGEIPVSVGQLTSLIRLILSKNSLSGSIPSSLGLCSSLQLLDLSSNNLSGRIPSELFDIEALDITLNLSHNALSGVIPPQVSSLNKLSALDLSHNKLEGDLVALSGLENLVSLNISFNIFTGYLPDIKLFHQLSPTDLEGNHGLCPSGRDSCFISNSAMTKIHNNSDSNKARRMKLCLGLLSAFTIAMAIFGILTVYRAKKRAQDDNNSEMGGDSWPWQFTPFQKLNFTIDQVLKCLVDSNVIGKGCSGVVYRAELENGDVIAVKKLWPTTLGTGYDRQNDKLAVHGGGVRDSFSAEVKTLGSIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERSGGNCLDWDIRYRILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGPHFEPYIADFGLAKLVDDGDFARSSSTLAGSYGYIAPEYGYMMKITEKSDVYSYGIVVLEVLTGKQPIDPTIPDGLHIVDWVRQKRGGSEVLDPSLCARPEPEIEEILQTLGVALLCVNPGPEDRPTMKDVAAMLKEIRQEREEYMKVDVLLHGSSANEEDNNNNNSSSDQDPRGNTMKHSYPINSNNTSFSASLFVSPSSSNTEVAFK 1141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2582 1141 Gene3D Transferase(Phosphotransferase) domain 1 874 1090 - -
Prci13g2582 1141 SUPERFAMILY RNI-like 206 520 - -
Prci13g2582 1141 Coils Coil 1060 1080 - -
Prci13g2582 1141 Gene3D Ribonuclease Inhibitor 610 697 IPR032675 -
Prci13g2582 1141 ProSiteProfiles Leucine-rich repeat profile. 342 365 IPR001611 GO:0005515
Prci13g2582 1141 SUPERFAMILY L domain-like 57 236 - -
Prci13g2582 1141 SUPERFAMILY L domain-like 486 691 - -
Prci13g2582 1141 SMART serkin_6 782 1067 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2582 1141 PRINTS Leucine-rich repeat signature 487 500 - -
Prci13g2582 1141 PRINTS Leucine-rich repeat signature 629 642 - -
Prci13g2582 1141 ProSiteProfiles Leucine-rich repeat profile. 631 653 IPR001611 GO:0005515
Prci13g2582 1141 SMART LRR_typ_2 556 580 IPR003591 -
Prci13g2582 1141 SMART LRR_typ_2 508 531 IPR003591 -
Prci13g2582 1141 SMART LRR_typ_2 412 436 IPR003591 -
Prci13g2582 1141 SMART LRR_typ_2 340 364 IPR003591 -
Prci13g2582 1141 SMART LRR_typ_2 147 171 IPR003591 -
Prci13g2582 1141 SMART LRR_typ_2 581 604 IPR003591 -
Prci13g2582 1141 SMART LRR_typ_2 292 316 IPR003591 -
Prci13g2582 1141 SMART LRR_typ_2 484 507 IPR003591 -
Prci13g2582 1141 ProSitePatterns Protein kinases ATP-binding region signature. 788 811 IPR017441 GO:0005524
Prci13g2582 1141 Gene3D Ribonuclease Inhibitor 332 427 IPR032675 -
Prci13g2582 1141 Gene3D Ribonuclease Inhibitor 32 144 IPR032675 -
Prci13g2582 1141 ProSiteProfiles Leucine-rich repeat profile. 414 436 IPR001611 GO:0005515
Prci13g2582 1141 Gene3D Ribonuclease Inhibitor 527 609 IPR032675 -
Prci13g2582 1141 FunFam Predicted protein 189 287 - -
Prci13g2582 1141 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 466 1068 - -
Prci13g2582 1141 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 288 396 - -
Prci13g2582 1141 Pfam Protein kinase domain 785 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2582 1141 Gene3D Ribonuclease Inhibitor 428 526 IPR032675 -
Prci13g2582 1141 Gene3D Ribonuclease Inhibitor 233 331 IPR032675 -
Prci13g2582 1141 ProSitePatterns Serine/Threonine protein kinases active-site signature. 919 931 IPR008271 GO:0004672|GO:0006468
Prci13g2582 1141 Gene3D Ribonuclease Inhibitor 145 232 IPR032675 -
Prci13g2582 1141 MobiDBLite consensus disorder prediction 1086 1117 - -
Prci13g2582 1141 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 414 701 - -
Prci13g2582 1141 MobiDBLite consensus disorder prediction 1088 1117 - -
Prci13g2582 1141 ProSiteProfiles Protein kinase domain profile. 782 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2582 1141 Pfam Leucine rich repeat 610 663 IPR001611 GO:0005515
Prci13g2582 1141 Pfam Leucine rich repeat 486 545 IPR001611 GO:0005515
Prci13g2582 1141 Pfam Leucine rich repeat 102 160 IPR001611 GO:0005515
Prci13g2582 1141 Pfam Leucine rich repeat 318 377 IPR001611 GO:0005515
Prci13g2582 1141 FunFam Nuclear pore complex protein NUP107 30 188 - -
Prci13g2582 1141 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 874 1085 - -
Prci13g2582 1141 SUPERFAMILY Protein kinase-like (PK-like) 767 1067 IPR011009 -
Prci13g2582 1141 Pfam Leucine rich repeat N-terminal domain 31 73 IPR013210 -
Prci13g2582 1141 Gene3D Phosphorylase Kinase; domain 1 767 873 - -
Prci13g2582 1141 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g34110 765 873 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2582 Prci-Chr13 39913629 39917472 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2582 29 1086 Receptor kinase-like Gene Family AT5G56040 47.251 0.0 937
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci13g2582 Pkinase 2.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2582 - - gmx:100794698 1584.31