Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2581 ATGGAGGAAGAACATGCTTTGAATGTTAACGATGAAAGTGAGATCTGGCTTCAAGACGCGCAAGACGAGCTTCTTGGTGTGAACGAAGCATCCATGTTCTATGCTGATTTACCTCCTCTCCCAGATTTTCCATGCATGTCTTCCTCTTCGTCGTCTTCCTCAACTCCAACACTTCAAGTCAGGACCGCCACGTGCTCCACCACATCTTCATCCTCCACTGCTACCTCATCATCGGCCTCTGCCGTGTCTTGGGCAGTTCTCAAGTCCGATGCCGAGGATAATCTTCTGGTGGAGGATGCGGTGGCTCCGCTGCCACTGGCAACCTTGTCCTCCACCGCTTCCAGGGAGCTCATGCCCCCGCCGGTCAATTGTGATGGCGAGATGGAGGAGCCTTTTCCGTGCCTGGACATGCTAGAGATCAACGATTTCTTCGACCCGTTATTGGTTTTTCAAGATGATGATTGCCAGTTAGAAGAATATCCCCAGAATCAGATAGAGCGGCGGCAGGAGCAACTTGTAATTACGATGCAGCAGCAACCAGAGGATCAAGATCAACATGCGCTGTCTAATGGTAATGACTGTGAAGAAGAGATTCAAGGAAAGGGAGGAAACCCGGATGGGGAAATGAGCGACGTGTTCTTGGAGTGGCTCAAGACGAACAAGGATAGCGTCTCTGCGAATGACTTGAGGAGCGTAAAGCTCAAAAAATCAACCATAGAGTGTGCTGCCAAGCGTTTAGGAGGAGGAAAAGAAGCCATGAAGCAATTGTTGAAGCTTATTCTTGAATGGGTTCAAACTAGCCATCTCCAAAACAAAAGGCGCTGTGCCAAGGAGAATATTATCAATACTAATGATAGTGCGCCTTCATATTTTCTCACTACAAACCCTAGCTCTAATTCCAACCCAAATTTATTTGGAATACCCCAGTCATGTCAATGGGTTTCTCCTCTGCAGCCTTATGCGACAGATCCGGCCACTATGGTGGCCGTGCCGCCACCTTCTTATCAATCGATTGGGTATCCGGGCGACCCTTGTTCAAATGGAGCATTGAACAATATCAATTCTCACCAACCTGCTAGTACTGAACATAACATGATGGAAACGGCTCATTCATGGCCTCCCTCCCAGTTCACGGTTGCTCCCCACTGCAACCAGTCGTATGGGGTCAATAATCTTCACCAAGCTGGTTCACCACCCTTACAGGCGGGGTTTGGCGGCTATGGCAATCAGTATTCATATCACTATTTTCATGGCGTGGCGGCGGGTGATAAGATGATGAGGTTAGGTCCCTCGGCGACAAAAGAGGCAAGGAAGAAGAGGATGGCGAGGCAGAGAAGGTATTTGTCTCATCATAGGAACCAGACACACCAGGGCCAACTACAGAATCGTGATAATAATGAGCCAATTGCAAGATTGGGAAGTGATTATAATTGCACCGGAGCTTCCGCAAATACGGCGAATTGGGTTTACTGGGGGTCACTGGCTGGAGGGGCAGCTTCCCTGGGACCAGTCATTCCAGCTGAAACCCCGCAGGTTTTGGATCGGACCGCCATGGAAACACAGAATTATCAAACTACAGTCCCATCAACAGATCAAAGGCGCCAGGGATTGAAGACAGAGAAGAACTTGAAGTTCCTTCTTCAGAAGGTGTTGAAGCAAAGCGACGTTGGTAGCTTGGGGAGAATTGTGTTGCCAAAAAAAGAGGCTGAAGCCCACTTGCCAGAATTAGAGGCAAGAGATGGCATTTCTATAGCAATGGAAGACGTTGGAACCTCTCGTGTTTGGAACATGCGCTATAGATACTGGCCAAACAACAAAAGCAGGATGTATCTGCTCGAGAATACTGGAGATTTCGTGAAAGCCAACGGACTCCAAGAGGGAGACTTCATAGTGTTGTACTCAGACGTCAAGTGTGGCAAATTTTTGATAAGAGGAGTGAAAGTAAGGGAAGTAGCGGGTGGGGCAAAGACAGATCAGAGCAAGAAAGCCGGAAAAACGCAGAAAGCAGCTGCTATTGCTAATAATGAGTCGCCCTCTACAGTGTCACCAGCTCAGAAAAAAAGTAGAAAATGA 2073 0.4824 MEEEHALNVNDESEIWLQDAQDELLGVNEASMFYADLPPLPDFPCMSSSSSSSSTPTLQVRTATCSTTSSSSTATSSSASAVSWAVLKSDAEDNLLVEDAVAPLPLATLSSTASRELMPPPVNCDGEMEEPFPCLDMLEINDFFDPLLVFQDDDCQLEEYPQNQIERRQEQLVITMQQQPEDQDQHALSNGNDCEEEIQGKGGNPDGEMSDVFLEWLKTNKDSVSANDLRSVKLKKSTIECAAKRLGGGKEAMKQLLKLILEWVQTSHLQNKRRCAKENIINTNDSAPSYFLTTNPSSNSNPNLFGIPQSCQWVSPLQPYATDPATMVAVPPPSYQSIGYPGDPCSNGALNNINSHQPASTEHNMMETAHSWPPSQFTVAPHCNQSYGVNNLHQAGSPPLQAGFGGYGNQYSYHYFHGVAAGDKMMRLGPSATKEARKKRMARQRRYLSHHRNQTHQGQLQNRDNNEPIARLGSDYNCTGASANTANWVYWGSLAGGAASLGPVIPAETPQVLDRTAMETQNYQTTVPSTDQRRQGLKTEKNLKFLLQKVLKQSDVGSLGRIVLPKKEAEAHLPELEARDGISIAMEDVGTSRVWNMRYRYWPNNKSRMYLLENTGDFVKANGLQEGDFIVLYSDVKCGKFLIRGVKVREVAGGAKTDQSKKAGKTQKAAAIANNESPSTVSPAQKKSRK 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2581 690 MobiDBLite consensus disorder prediction 179 206 - -
Prci13g2581 690 MobiDBLite consensus disorder prediction 434 467 - -
Prci13g2581 690 FunFam B3 domain-containing transcription factor FUS3 543 658 - -
Prci13g2581 690 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 212 673 IPR044800 GO:0003700
Prci13g2581 690 ProSiteProfiles B3 DNA-binding domain profile. 547 649 IPR003340 GO:0003677
Prci13g2581 690 Pfam B3 DNA binding domain 548 643 IPR003340 GO:0003677
Prci13g2581 690 CDD BfiI_C_EcoRII_N_B3 545 646 - -
Prci13g2581 690 Gene3D - 537 651 IPR015300 -
Prci13g2581 690 MobiDBLite consensus disorder prediction 654 690 - -
Prci13g2581 690 SUPERFAMILY DNA-binding pseudobarrel domain 546 643 IPR015300 -
Prci13g2581 690 SMART B3_2 547 647 IPR003340 GO:0003677
Prci13g2581 690 MobiDBLite consensus disorder prediction 453 467 - -
Prci13g2581 690 MobiDBLite consensus disorder prediction 670 690 - -
Prci13g2581 690 MobiDBLite consensus disorder prediction 438 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2581 Prci-Chr13 39890222 39893122 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2581 14 679 B3 DNA Binding Superfamily AT3G24650 44.163 3.16e-146 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Prci13g2581 B3 3.2e-18 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2581 K09287 - gmx:100810343 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g2581 13 39890222 39893122 Prci13g2581 13 39890222 39893122 ECH