Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2568 ATGGCCAATCCTCATCTTCGCGCTCTACTACGGTGGCGCAAATTGGCCAAGAAGGACTGGGCCATAGCCGCCGTGGGCTTCACTCTCGCTGTCGTCTTTGCACTTTTTCTCGTCTCGGATTCCTGGCGAAGCGTCAATGGTTCCGAAACCAACCCCTCATTCGGTCTTAGCCAAAACGATGATCTCGTCGATTTGACCCTTCTTCGAAATGCCAAGGATAGAGCCGCTTTTTGCTTGGATGGGAGCTTGCCGGGATACCTTCAAAGGGGATTTGGATCCGGCTCTAACAATTGGATACTTCACATTGAGGGCGGAGGTTGGTGTAATACGATTTCTTCGTGTTCTCGGCGAAAAATGACTGCTTTGGGATCCTCAAAGTATATGGATAGACAACATTTCTCGGGAATCTTAAGTTCTGACCCTGCTCAGAATCCCGACTTCTATAGCTGGAACAAGGTTGATATACGTTATTGTGATGGTGCGTCCCTTGCTGGTCACCCAGAAAACGAGATTAAGAAAGGAAATAAATTATTCTTCAGAGGTCAGTTCATATGGGAAGCACTTATGGATGAACTCTTATCAATTGGCTTGTCTGAAGCCAAAGAGGCTCTGCTTTCAGGATGCTCTGCGGGAGGATTGGCAACTCTTATACATTGTGATGACTTTCGAGGACTTCTTCCAAAGGATGCAACCGTCAAGTGTCTTGCTGATGCAGGCTTCTTCCTTGATGAGAAGGATATTCTTGGCAATAACACCATGAGATCCTTTTATCATGATGTTGTCCAGCTTCAGGGTGTTATGAAGAGCTTGCACAGGGACTGCACTACTAGTATGGAACCATCTAGGTGTTTCTTTCCAGCTGAAATTATGAAAAGGCTACAGACTCCTGTGTTCCTTGTCCAGCCAGCTTATGACTTCTGGCAGATACAACATATTCTGGTGCCAGCTGGATCAGATCCTCAAGGCCGCTGGAAAAGATGCAGACTGAGCATTTACAATTGTGATGCCAATCTGATGGATATTCTTCAAGGTTTCCGAAATTCTTTGCTGAAGTCCGTGAATGAATTCCGGCATCCAAAGGAAGCTGGACTGTTTATAAATTCCTGTTTTACTCACTGCCAGACTTGGATGTCTGAGACGTGGCATTCAGCCAGTTCTCCTAAAATAAACAATAAGACAATAGCTGAAGCTGTTGCTGACTGGTTTTTTGACAGAGAAGTGGTGAAGCAAATCGACGGCCCTTATCCATGCAACCCCACTTGCCATAATATGGATTTCACTGCTGGACACTAA 1293 0.4571 MANPHLRALLRWRKLAKKDWAIAAVGFTLAVVFALFLVSDSWRSVNGSETNPSFGLSQNDDLVDLTLLRNAKDRAAFCLDGSLPGYHXQRGFGSGSNNWILHIEGGGWCNTISSCSRRKMTALGSSKYMDRQHFSGILSSDPAQNPDFYSWNKVDIRYCDGASLAGHPENEIKKGNKLFFRGQFIWEALMDELLSIGLSEAKEALLSGCSAGGLATLIHCDDFRGLLPKDATVKCLADAGFFLDEKDILGNNTMRSFYHDVVQLQGVMKSLHRDCTTSMEPSRCFFPAEIMKRLQTPVFLVQPAYDFWQIQHILVPAGSDPQGRWKRCRLSIYNCDANLMDILQGFRNSLLKSVNEFRHPKEAGLFINSCFTHCQTWMSETWHSASSPKINNKTIAEAVADWFFDREVVKQIDGPYPCNPTCHNMDFTAGH 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2568 431 Pfam Pectinacetylesterase 57 408 IPR004963 GO:0016787
Prci13g2568 431 PANTHER NOTUM-RELATED 35 425 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2568 Prci-Chr13 39793671 39799892 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2568 1 394 Carbohydrate Esterase AT3G09410 58.543 7.32e-177 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2568 K19882 - qsa:O6P43_026533 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g2568 13 39793671 39799892 Prci13g2568 13 39793671 39799892 ECH