Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2566 ATGGCAACTCCCAGCTGCTCGTTGAACACTCCAAAAACTTCCAATTCTTGCACCCCTCTGAAAACTTCAAACCCCAAGTCAATCTCCAAGGTCAGGGTCATCATAAGAGTTCGACCCTTTCTTCCTCATGAAATATCTGCAAGAAATGGAAATTCAAGCTCATGCATCTCCTTTCTGGACCAGGACTCTGAATCCCCGGAGGAAATCACTGTCTATCTCAAAGACCCTGAAACCAGCCGAAGGGAGTGTTATCAGTTGGATTCCTTCTTTGGCCAAGAGGATAACAATGTGGGCCAGATTTTCCATAGAGAAGTAAGCCCTTTGATTTCAGGTGTCTTCAACGGCTGCAATGCAACTGTGTTCGCTTATGGAGCTACTGGAAGTGGAAAAACATACACTATGCAGGGCACTGAGGAACAACCTGGCTTAATGCCATTAGCAATGTCTGCGATCCTGTCCATATGCCCAAGCACTGGTTGTACAGCACATATTTCATACTATGAGGTTTATATGGACAGATGCTACGACCTCTTGGAGGTCAAAGCAAAGGAGATTTCAGTGATGGATGACAAAGATGGACAAATCCACCTCAGGGGACTCTCTCAGGTTCCCATACATACAATGTCTGAATTTATGGAGACATTTTCTACTGCTGTGCAGAGAAGGAAAGTTGCACACACAGGCCTCAATGATGTCTCAAGTAGGAGTCATGGAGTGCTTTTGATTTCTGTCTTCAATCCTTCCACTGATGGCACTAAAGGGTCTGTGTGTGGGAAGTTGAATCTCATAGACTTGGCAGGTAACGAAGACAACAAAAGAACTTGCAATGAAGGAATTCGTCTCCAAGAAAGTGCCAAAATAAACCAGTCTCTGTTTGCTTTGTCTAATGTGATATATGCATTGAACAATAACAAACGTCGAGTGCCTTATCGAGAAACCAAGTTGACCCGGATATTGCAGGACTCTCTAGGAGGAACTAGCCGTGCACTTATGGTTGCTTGCTTGAATCCAGGAGAATACCAGGAGTCTGTTCATACGGTGAGTTTGGCTGCCAGGTCAAGGCATATCTCCAATTTTGTACCTTCGACTCAGAAACAAGAGACCCCAAAAGTCAGAGTTGACATGGAAGCCAAATTAAGAGCTTGGCTAGAATCAAAAGGCAAAACAAAGAGCTCACAAAGACTTGCAGCATTTAATTCTCCATGTTTAAGGAAAACTCCCAAGTCCATAAACTCTGCCAAGAGATCTGTCACCTTTGTGAGTTCTGTGAAGGGAGGAGGTATTGTGATAAGCCAAAATGCTGAACGAACAAAAGAAAGGGCTTTTGCAGTGGCTTTTAGGAATCTGCCAGATGGTGAAGGCACCTTTGATTTTTGTTTCGAGAGCCCACATCACGGTGATATGGACAATAGAGAAGAGGCTGTTACCAATGAGGCTGCATCAGAATCCAATAATTATCCACGAGTGGAGTCATTGGCCAAGGAGGAGAACTCACCAATTATGAACAGAAGAAAGATTATTGGTCAACCACCACTGACAATGAAAATACATTACGAAGTCCTCTCAGAAAGGCACTCTCTCCCATCAATATCAATGAGATCCAAAATAACAGCACTCCACTTGACAAATTCAGTGCAAGGAGTTCTATTGAAGAACTGTCTAGTTCAGGAATATGTTTATTTCTTGAACAATGCGAGCAGAAGGGAACTGCTTGAGTTGAAGGGTATAGGAGAGAAAATGGCAGAATATATAATAGATCTCAGAGCCGAAAGCCCTATAAAATCTTTAAATGATTTGGAGAAGATTGGCCTCTCTTCCAAACAGGCTTACAACTTGTTCACTAAAGCTGCAAGAACGATATTCGAAGACAATGCAAAAGAAACAAGTGCAACAGTGACTTGCTGA 1905 0.4299 MATPSCSLNTPKTSNSCTPLKTSNPKSISKVRVIIRVRPFLPHEISARNGNSSSCISFLDQDSESPEEITVYLKDPETSRRECYQLDSFFGQEDNNVGQIFHREVSPLISGVFNGCNATVFAYGATGSGKTYTMQGTEEQPGLMPLAMSAILSICPSTGCTAHISYYEVYMDRCYDLLEVKAKEISVMDDKDGQIHLRGLSQVPIHTMSEFMETFSTAVQRRKVAHTGLNDVSSRSHGVLLISVFNPSTDGTKGSVCGKLNLIDLAGNEDNKRTCNEGIRLQESAKINQSLFALSNVIYALNNNKRRVPYRETKLTRILQDSLGGTSRALMVACLNPGEYQESVHTVSLAARSRHISNFVPSTQKQETPKVRVDMEAKLRAWLESKGKTKSSQRLAAFNSPCLRKTPKSINSAKRSVTFVSSVKGGGIVISQNAERTKERAFAVAFRNLPDGEGTFDFCFESPHHGDMDNREEAVTNEAASESNNYPRVESLAKEENSPIMNRRKIIGQPPLTMKIHYEVLSERHSLPSISMRSKITALHLTNSVQGVLLKNCLVQEYVYFLNNASRRELLELKGIGEKMAEYIIDLRAESPIKSLNDLEKIGLSSKQAYNLFTKAARTIFEDNAKETSATVTC 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2566 634 PRINTS Kinesin heavy chain signature 227 244 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci13g2566 634 PRINTS Kinesin heavy chain signature 259 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci13g2566 634 PRINTS Kinesin heavy chain signature 308 329 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci13g2566 634 PRINTS Kinesin heavy chain signature 115 136 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci13g2566 634 FunFam Kinesin-like protein KIN-10C 548 620 - -
Prci13g2566 634 Gene3D Kinesin motor domain 27 397 IPR036961 -
Prci13g2566 634 ProSitePatterns Kinesin motor domain signature. 258 269 IPR019821 GO:0003777|GO:0005524|GO:0007018
Prci13g2566 634 ProSiteProfiles Kinesin motor domain profile. 30 356 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci13g2566 634 FunFam Kinesin-like protein 27 396 - -
Prci13g2566 634 Gene3D - 551 619 - -
Prci13g2566 634 MobiDBLite consensus disorder prediction 1 24 - -
Prci13g2566 634 Pfam Kinesin motor domain 36 356 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci13g2566 634 SMART kinesin_4 28 364 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci13g2566 634 SUPERFAMILY RuvA domain 2-like 559 602 IPR010994 -
Prci13g2566 634 CDD KISc_KID_like 31 354 - -
Prci13g2566 634 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 384 IPR027417 -
Prci13g2566 634 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 29 420 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2566 Prci-Chr13 39762193 39768911 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2566 30 405 Calmodulin-binding Proteins AT5G65930 32.732 1.62e-44 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2566 K10403 - gmx:100804591 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g2566 13 39762193 39768911 Prci13g2566 13 39762193 39768911 ECH