Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci13g2566 | ATGGCAACTCCCAGCTGCTCGTTGAACACTCCAAAAACTTCCAATTCTTGCACCCCTCTGAAAACTTCAAACCCCAAGTCAATCTCCAAGGTCAGGGTCATCATAAGAGTTCGACCCTTTCTTCCTCATGAAATATCTGCAAGAAATGGAAATTCAAGCTCATGCATCTCCTTTCTGGACCAGGACTCTGAATCCCCGGAGGAAATCACTGTCTATCTCAAAGACCCTGAAACCAGCCGAAGGGAGTGTTATCAGTTGGATTCCTTCTTTGGCCAAGAGGATAACAATGTGGGCCAGATTTTCCATAGAGAAGTAAGCCCTTTGATTTCAGGTGTCTTCAACGGCTGCAATGCAACTGTGTTCGCTTATGGAGCTACTGGAAGTGGAAAAACATACACTATGCAGGGCACTGAGGAACAACCTGGCTTAATGCCATTAGCAATGTCTGCGATCCTGTCCATATGCCCAAGCACTGGTTGTACAGCACATATTTCATACTATGAGGTTTATATGGACAGATGCTACGACCTCTTGGAGGTCAAAGCAAAGGAGATTTCAGTGATGGATGACAAAGATGGACAAATCCACCTCAGGGGACTCTCTCAGGTTCCCATACATACAATGTCTGAATTTATGGAGACATTTTCTACTGCTGTGCAGAGAAGGAAAGTTGCACACACAGGCCTCAATGATGTCTCAAGTAGGAGTCATGGAGTGCTTTTGATTTCTGTCTTCAATCCTTCCACTGATGGCACTAAAGGGTCTGTGTGTGGGAAGTTGAATCTCATAGACTTGGCAGGTAACGAAGACAACAAAAGAACTTGCAATGAAGGAATTCGTCTCCAAGAAAGTGCCAAAATAAACCAGTCTCTGTTTGCTTTGTCTAATGTGATATATGCATTGAACAATAACAAACGTCGAGTGCCTTATCGAGAAACCAAGTTGACCCGGATATTGCAGGACTCTCTAGGAGGAACTAGCCGTGCACTTATGGTTGCTTGCTTGAATCCAGGAGAATACCAGGAGTCTGTTCATACGGTGAGTTTGGCTGCCAGGTCAAGGCATATCTCCAATTTTGTACCTTCGACTCAGAAACAAGAGACCCCAAAAGTCAGAGTTGACATGGAAGCCAAATTAAGAGCTTGGCTAGAATCAAAAGGCAAAACAAAGAGCTCACAAAGACTTGCAGCATTTAATTCTCCATGTTTAAGGAAAACTCCCAAGTCCATAAACTCTGCCAAGAGATCTGTCACCTTTGTGAGTTCTGTGAAGGGAGGAGGTATTGTGATAAGCCAAAATGCTGAACGAACAAAAGAAAGGGCTTTTGCAGTGGCTTTTAGGAATCTGCCAGATGGTGAAGGCACCTTTGATTTTTGTTTCGAGAGCCCACATCACGGTGATATGGACAATAGAGAAGAGGCTGTTACCAATGAGGCTGCATCAGAATCCAATAATTATCCACGAGTGGAGTCATTGGCCAAGGAGGAGAACTCACCAATTATGAACAGAAGAAAGATTATTGGTCAACCACCACTGACAATGAAAATACATTACGAAGTCCTCTCAGAAAGGCACTCTCTCCCATCAATATCAATGAGATCCAAAATAACAGCACTCCACTTGACAAATTCAGTGCAAGGAGTTCTATTGAAGAACTGTCTAGTTCAGGAATATGTTTATTTCTTGAACAATGCGAGCAGAAGGGAACTGCTTGAGTTGAAGGGTATAGGAGAGAAAATGGCAGAATATATAATAGATCTCAGAGCCGAAAGCCCTATAAAATCTTTAAATGATTTGGAGAAGATTGGCCTCTCTTCCAAACAGGCTTACAACTTGTTCACTAAAGCTGCAAGAACGATATTCGAAGACAATGCAAAAGAAACAAGTGCAACAGTGACTTGCTGA | 1905 | 0.4299 | MATPSCSLNTPKTSNSCTPLKTSNPKSISKVRVIIRVRPFLPHEISARNGNSSSCISFLDQDSESPEEITVYLKDPETSRRECYQLDSFFGQEDNNVGQIFHREVSPLISGVFNGCNATVFAYGATGSGKTYTMQGTEEQPGLMPLAMSAILSICPSTGCTAHISYYEVYMDRCYDLLEVKAKEISVMDDKDGQIHLRGLSQVPIHTMSEFMETFSTAVQRRKVAHTGLNDVSSRSHGVLLISVFNPSTDGTKGSVCGKLNLIDLAGNEDNKRTCNEGIRLQESAKINQSLFALSNVIYALNNNKRRVPYRETKLTRILQDSLGGTSRALMVACLNPGEYQESVHTVSLAARSRHISNFVPSTQKQETPKVRVDMEAKLRAWLESKGKTKSSQRLAAFNSPCLRKTPKSINSAKRSVTFVSSVKGGGIVISQNAERTKERAFAVAFRNLPDGEGTFDFCFESPHHGDMDNREEAVTNEAASESNNYPRVESLAKEENSPIMNRRKIIGQPPLTMKIHYEVLSERHSLPSISMRSKITALHLTNSVQGVLLKNCLVQEYVYFLNNASRRELLELKGIGEKMAEYIIDLRAESPIKSLNDLEKIGLSSKQAYNLFTKAARTIFEDNAKETSATVTC | 634 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci13g2566 | 634 | PRINTS | Kinesin heavy chain signature | 227 | 244 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Prci13g2566 | 634 | PRINTS | Kinesin heavy chain signature | 259 | 277 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Prci13g2566 | 634 | PRINTS | Kinesin heavy chain signature | 308 | 329 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Prci13g2566 | 634 | PRINTS | Kinesin heavy chain signature | 115 | 136 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Prci13g2566 | 634 | FunFam | Kinesin-like protein KIN-10C | 548 | 620 | - | - | |
Prci13g2566 | 634 | Gene3D | Kinesin motor domain | 27 | 397 | IPR036961 | - | |
Prci13g2566 | 634 | ProSitePatterns | Kinesin motor domain signature. | 258 | 269 | IPR019821 | GO:0003777|GO:0005524|GO:0007018 | |
Prci13g2566 | 634 | ProSiteProfiles | Kinesin motor domain profile. | 30 | 356 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Prci13g2566 | 634 | FunFam | Kinesin-like protein | 27 | 396 | - | - | |
Prci13g2566 | 634 | Gene3D | - | 551 | 619 | - | - | |
Prci13g2566 | 634 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Prci13g2566 | 634 | Pfam | Kinesin motor domain | 36 | 356 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Prci13g2566 | 634 | SMART | kinesin_4 | 28 | 364 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Prci13g2566 | 634 | SUPERFAMILY | RuvA domain 2-like | 559 | 602 | IPR010994 | - | |
Prci13g2566 | 634 | CDD | KISc_KID_like | 31 | 354 | - | - | |
Prci13g2566 | 634 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 30 | 384 | IPR027417 | - | |
Prci13g2566 | 634 | PANTHER | CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED | 29 | 420 | IPR027640 | GO:0003777|GO:0007018 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci13g2566 | Prci-Chr13 | 39762193 | 39768911 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci13g2566 | 30 | 405 | Calmodulin-binding Proteins | AT5G65930 | 32.732 | 1.62e-44 | 169 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci13g2566 | K10403 | - | gmx:100804591 | 848.58 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Prci13g2566 | 13 | 39762193 | 39768911 | Prci13g2566 | 13 | 39762193 | 39768911 | ECH |