Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2564 ATGGCTGAATTGAAATCAGAGGAGTGTTGTCTAGAGAACAAGCAATCTACTGCTGCGTCTAACTCCTCTATCTCTGAAGGCAGTGCCAGTGCTGTACACAAGTCCCCTGGGAGATATAGCCCCGCATCAACATCACCCTCCCATCGGAGGACCACTGGCCCCATCAGGCGTGCAAAGGGTGGCTGGACAGCCCAGGAGGATGAGACATTGAGGAATGCTGTTGCAGCTTTCAAGGGCAAGAGTTGGAAGAAAATAGCTGAATATTTTCCTGATAGATCAGAAGTGCAATGTCTGCACAGATGGCAAAAGGTTCTTAATCCTGAGCTTGTTAAAGGCCCTTGGACTCCTGAGGAGGATGACAAAATTGTTGAACTGGTATCAAAATATGGGCCAGCAAAATGGTCTATGATAGCAAAATCTTTGCCTGGTCGCATTGGGAAACAGTGTCGAGAGCGATGGCACAATCATCTTAATCCTGAAATAAAGAAGGATGCCTGGACTTTGGAGGAAGAACTGGCCCTCATGAATGCTCATCACATGCATGGGAACAAATGGGCTGAAATTGCTAAAGTTTTGCCTGGAAGGACTGATAATGCAATAAAGAACCACTGGAATAGTTCATTAAAGAAAAAATTAGAATTTTATTTAGCTACAGGAAATCTTCCACCAATCCAAAAGAACGGTGCTCAAGGTGGTGTGAAAGATACAATAAGACGCTCTTCTAGTAAAACAGTACATGTATGCTCAAATAAAGTATCAGATACTGCCGCTGAGACATCATCAGAAAATACAGAGAACACTAAAGATGGCGGTGGAAAGAATCAACTAGAGTCCTTGGCAACTGTGAGAGAGTTTGATAATTCTCTGAACGTTCCTGCAAATGAAGGTGCTGATTCTGACTTTGGAGAATGGAGGCTCAGATCATCCAATATAGATCTTGGCTGCAGCAACTCAGAACCAGTGTCAAGGGATAATTTTGGATTGACCAGCGACCCAAAATTTGATAACACTGGACTAAATGGCAAGCATAAAGTTGGGAATTGTGTGAATAATGGCGAAATGAGAAGTAGCAGGCTAGTTGGTACATCTTTTTCACAGGATAGTCCATCCTCTGGTTCTTTGTATTATGAGCCTCCATTGTTGGAGAGCTCAGTTCCTTTAGATTCCCTTTATTTAAGTATGTATTGCCTGCAGAACGAGTACAATGCTACTCAAGTAATGTCACCTGTCGGTTTCTTCACCCCACCTTGTGTGAAGGGCAGTGAATTATGCACAGAGACTCCTGAATCAATATTGAAAATGGCTGCTAAAACTTTCCCATATACTCCTTCCATATTGAGGAAGAGAAAGAATGGAGTCCAAGCACATGTAACTCCTTGTAAATTTGTGAAAGTGGATGGTGGATTTCATACTTCTAATGAACAGGAGGAAACCAAGAATAATTCTGGTTCTGGGTATGGAGAGCTCTTTCAGAGTCCAGCAAGTGATGACATCCTCAATAACATGGCTTTCAATGCTTCTCCCCCTTACTGGTTAAGATTCAAGCGAAAAGCTTTTGTCAAGTCTGTGGAGAAACAACTTGAGTTTGCTTTTGATAAAGAGAAGCATGATAGCAACAAAATGGAAAAATCTGCTAGGAGCACTGCAATGGCTGGAGATTGCTTACCTGATACAAAAGTGGCAGTGACCTAG 1692 0.4255 MAELKSEECCLENKQSTAASNSSISEGSASAVHKSPGRYSPASTSPSHRRTTGPIRRAKGGWTAQEDETLRNAVAAFKGKSWKKIAEYFPDRSEVQCLHRWQKVLNPELVKGPWTPEEDDKIVELVSKYGPAKWSMIAKSLPGRIGKQCRERWHNHLNPEIKKDAWTLEEELALMNAHHMHGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKLEFYLATGNLPPIQKNGAQGGVKDTIRRSSSKTVHVCSNKVSDTAAETSSENTENTKDGGGKNQLESLATVREFDNSLNVPANEGADSDFGEWRLRSSNIDLGCSNSEPVSRDNFGLTSDPKFDNTGLNGKHKVGNCVNNGEMRSSRLVGTSFSQDSPSSGSLYYEPPLLESSVPLDSLYLSMYCLQNEYNATQVMSPVGFFTPPCVKGSELCTETPESILKMAAKTFPYTPSILRKRKNGVQAHVTPCKFVKVDGGFHTSNEQEETKNNSGSGYGELFQSPASDDILNNMAFNASPPYWLRFKRKAFVKSVEKQLEFAFDKEKHDSNKMEKSARSTAMAGDCLPDTKVAVT 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2564 563 ProSiteProfiles Myb-like domain profile. 106 157 IPR001005 -
Prci13g2564 563 Gene3D - 110 163 - -
Prci13g2564 563 Gene3D - 58 109 - -
Prci13g2564 563 MobiDBLite consensus disorder prediction 244 274 - -
Prci13g2564 563 MobiDBLite consensus disorder prediction 37 51 - -
Prci13g2564 563 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 162 212 IPR017930 -
Prci13g2564 563 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 105 IPR017930 -
Prci13g2564 563 MobiDBLite consensus disorder prediction 1 64 - -
Prci13g2564 563 Pfam Myb-like DNA-binding domain 111 157 IPR001005 -
Prci13g2564 563 Pfam Myb-like DNA-binding domain 163 206 IPR001005 -
Prci13g2564 563 Pfam Myb-like DNA-binding domain 59 105 IPR001005 -
Prci13g2564 563 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 106 161 IPR017930 -
Prci13g2564 563 FunFam Transcription factor MYB3R-2 164 227 - -
Prci13g2564 563 Gene3D - 164 230 - -
Prci13g2564 563 FunFam Transcriptional activator Myb isoform A 111 163 - -
Prci13g2564 563 SUPERFAMILY Homeodomain-like 56 112 IPR009057 -
Prci13g2564 563 ProSiteProfiles Myb-like domain profile. 54 105 IPR001005 -
Prci13g2564 563 CDD SANT 113 157 IPR001005 -
Prci13g2564 563 PANTHER MYB PROTEIN-RELATED 59 130 - -
Prci13g2564 563 SUPERFAMILY Homeodomain-like 108 204 IPR009057 -
Prci13g2564 563 MobiDBLite consensus disorder prediction 11 30 - -
Prci13g2564 563 SMART sant 110 159 IPR001005 -
Prci13g2564 563 SMART sant 58 107 IPR001005 -
Prci13g2564 563 SMART sant 162 210 IPR001005 -
Prci13g2564 563 ProSiteProfiles Myb-like domain profile. 158 208 IPR001005 -
Prci13g2564 563 CDD SANT 62 105 IPR001005 -
Prci13g2564 563 FunFam Transcriptional activator Myb isoform A 58 110 - -
Prci13g2564 563 CDD SANT 165 208 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2564 Prci-Chr13 39747008 39754527 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2564 2 553 MYB Transcription Factor Family AT3G09370 47.611 2.96e-147 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci13g2564 Myb_DNA-binding 2.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2564 K09422 - gmx:100793280 767.303