Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2537 ATGACAATGGATCAGGGTCTTCGGGGCTTTACCGATTCCAGAAGTGAACAGCGATTGGGAAATCGATCTGTACCAATTCTGAAGCAGAATCAGAGTTTTGAAAATGCCTTCTTTGATCGTAGAAGGGAATTTCATTTCCCGCAATCTGATCAATTACCGGTTAATACGCCTTCTTCCTCTACCGTAACCCTTGAGGAGCATTCTCCAGAAGACTGTGATTTCTCCGATGCTGTTTTGAGTTACATAAATCAGATCCTTATGGAAGAAGACATGGAAGATAAGACGTGCATGCTTCAGGATTCTCTGGATCTTCAAGCAGCTGAGAAATCATTCTATGAAGCATTGGGTGAAAAATATCCACCTTCACCAGCACAAAATCATCCGAGTCATATGATCAATGAAAATGGTGGGGGCATGGGAAATAATTTCCCCAGAAATTACAGTGATTGTCACAGTAATAACAATGGTAATTCCAACGGAACTTCCATTCATCATTCCTTGGCTCAAAACCGTAATGAGTTTCCCTCGCAACTTATCCTAGGTAGTAGCATTTCCCAGTCGTCTTACAGCTCTTCAAGCAGTGTTGTGGAAGGGCCTGTGGATTCTCCGAGCAGCATTCTTCAAGTTCCGGATCTGAACAGCGAGAGCCAATCCATTTCACAATTTAAAAAAGGTGTCGAGGAGGCTAGTAGGTTTCTTCCAAATGGAAACAAGCTTTTTGCTGATTTAGGTGTGTGTGATCTATCACCAGAAGAACCAAAAGCAGGGACTCATGAAATATCAGCAAAAGTGGAGAAAGATGAAAGGGACTATTTTCATGGTGGGTCGAAGGTAAGAAAGCAGCCACACAGGGGAGAGGAAGATGGTGAAGAAAAGAGTAGCAAGCAAGCAGCAGTTTATACAGAACCAACGTTGCGTTCAGTGATGTTTGATCTAGTGCTTCTTTACACTGCTGGGGAAGGTAGGAACCATTACATGGCCCGCCGTGAAGCGTTGCAGAACAAGACTACCAAGGCAGGGGTGCCAAATGGTCAAGCCAAAGCTTCAAACGCTGGGAAGGGGCGTGGGAAGAAACAAAATGGGAGAAAGGCAGTGGTGGATTTGAGAACACTTCTGGTTCTGTGTGCACAAGCTGTTGCAGCAGATGATTACAAGAATGCACAAGAGTTATTAAAGCAAATCAGGCAGCACTCAAATCCTTTCGGTGATGGAAATCAAAGGCTGGCACATGTCTTTGCTGATGGACTTGATGCACGCTTGGCCGGCACTGGGAGCCAGATTTATAAAGGACTTGTCAATAAGAAAAGGTCAGCCGCTGATCTACTGAAAGCCTATCATCTCTACCTGGCTGCATGCCCTTTTAGGAAGATATCTAATTTTTTGTCAAACGTCACAATAAGGACAGCATCAGAGAATACAACGAGGGTCCATATTATAGATTTTGGTATTCATTATGGTTTCCAGTGGCCAACTTTCATACAGAGATTGGCAATGAGATCAGGAGGACACCCGCCAAAAATTCGAATCTCGGGAATAGACTTCCCACAACCTGGTTTCAGGCCAGCTGAGAGAATAGAAGAAACAGGAAGGCGGTTAGCAGATTATGCAAAAGCTTTCAATGTTCCATTTGAGTACGTTGCCATAGCAAAGAAATGGGAAACTATTCAGCTGGAGGAACTCAAGGTTGATAGGGACGAGTTCCTGGTTGTTAACTGTTTATATACGGCAAAGAACCTGCTGGATGAATCTGTAGCTGTGGACAGTCCAAGGAATGCATTCCTGAATCTGGTGAGGAAGATCAACCCGGACATATTCATTCACGGGATCATCAACGGGGCATTCAATGCTCCTTTCTTCGTTACCAGGTTCAGGGAAGCATTGTTTCACTACTCATCACTGTTTGACATGTTGGAAACTATAGTGCCTCGAGAGGACTGGGAGAGAATGCTGATCGAGAAGGAGATATTTGGGAGAGAAGCATTGAACGTGATAGCGTGCGAGGGAATCGAGAGAACAGAGAGACCAGAGACATATAAGCAGTGGCAAGCTCGTGTTCTCAGGGCAGGTTTTACACAGATTCCTTTTTCGCGGAGCCTAGTGGAGAGGGCCATGGATAAAGTAAGGAGTAGCTACCACAAGGATTTTCTCATTGATGAAGACAGCAAGTGGTTGTTACAAGGTTGGAAAGGACGAATCATCTATGCACTTTCTTGTTGGAGGCCTGCCTCAGCCTGA 2235 0.4465 MTMDQGLRGFTDSRSEQRLGNRSVPILKQNQSFENAFFDRRREFHFPQSDQLPVNTPSSSTVTLEEHSPEDCDFSDAVLSYINQILMEEDMEDKTCMLQDSLDLQAAEKSFYEALGEKYPPSPAQNHPSHMINENGGGMGNNFPRNYSDCHSNNNGNSNGTSIHHSLAQNRNEFPSQLILGSSISQSSYSSSSSVVEGPVDSPSSILQVPDLNSESQSISQFKKGVEEASRFLPNGNKLFADLGVCDLSPEEPKAGTHEISAKVEKDERDYFHGGSKVRKQPHRGEEDGEEKSSKQAAVYTEPTLRSVMFDLVLLYTAGEGRNHYMARREALQNKTTKAGVPNGQAKASNAGKGRGKKQNGRKAVVDLRTLLVLCAQAVAADDYKNAQELLKQIRQHSNPFGDGNQRLAHVFADGLDARLAGTGSQIYKGLVNKKRSAADLLKAYHLYLAACPFRKISNFLSNVTIRTASENTTRVHIIDFGIHYGFQWPTFIQRLAMRSGGHPPKIRISGIDFPQPGFRPAERIEETGRRLADYAKAFNVPFEYVAIAKKWETIQLEELKVDRDEFLVVNCLYTAKNLLDESVAVDSPRNAFLNLVRKINPDIFIHGIINGAFNAPFFVTRFREALFHYSSLFDMLETIVPREDWERMLIEKEIFGREALNVIACEGIERTERPETYKQWQARVLRAGFTQIPFSRSLVERAMDKVRSSYHKDFLIDEDSKWLLQGWKGRIIYALSCWRPASA 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2537 744 MobiDBLite consensus disorder prediction 338 360 - -
Prci13g2537 744 MobiDBLite consensus disorder prediction 1 21 - -
Prci13g2537 744 MobiDBLite consensus disorder prediction 49 65 - -
Prci13g2537 744 ProSiteProfiles GRAS family profile. 359 740 IPR005202 -
Prci13g2537 744 Pfam GRAS domain family 368 740 IPR005202 -
Prci13g2537 744 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 277 734 IPR005202 -
Prci13g2537 744 MobiDBLite consensus disorder prediction 49 68 - -
Prci13g2537 744 MobiDBLite consensus disorder prediction 252 297 - -
Prci13g2537 744 MobiDBLite consensus disorder prediction 190 212 - -
Prci13g2537 744 MobiDBLite consensus disorder prediction 252 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2537 Prci-Chr13 39599271 39602374 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2537 70 743 GRAS Transcription Factor Family AT2G37650 52.701 0.0 685
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci13g2537 GRAS 1.3e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2537 - - gmx:100801824 1006.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g2537 13 39599271 39602374 Prci13g2537 13 39599271 39602374 ECH