Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2534 ATGATTGAGACACCTATGGAGGAAGCTGTGAGGACTACCTGGTCAGAAGAAGACGATCTTGTGAGAGAATTTTTAGATGCGGTAACAGAAGATGCAGATTATCAGAGTTACTACAACACGAGAAAATCAAGCGAGGAGCAAGCCATTATGAATAGGTTCATCTCCAACATGTACTCAGGACCTACCATTACAGATATTGAGAATGCCTTGTCAGTGACATCCAACCAAAGAGAGCAATATTTCCAGCACCTCTCATCATCACCACACAGAGTTTGCATGTTGGAAAGAGGGTTGAATTTGAGCAGGAGTGAGAACAAGTATAGCCTGAAAATCAAGTGCTGCGGCAATGGGTTGAGCGATGATGGATATAAGTGGAGGAAGTACGGCCAGAAATCTATCAAGAACAGCCCCAATCCTAGGAGCTACTATAGGTGCACAAACCCAAGGTGCAGTGCCAAGAAGCAAGTGGAGAGATCCAGTGAAGAGCCTGACACTGTTATTGTCACTTATGAAGGGCTCCATCTCCACTATGCTTACCCATATTTTCTCATGGGCCAACCAGGTCATCAAGCCCATCCACCATTGAAAAACTGTAGGCCGGTCTTTTTACAAGCCCAAGCCCATGAGGAAGGCCGAGAATGTGAACAAGGTCATACTCATACCGGCCAGAAGCCCATAGAAACGGACGCTATCTTCCCCTCGACCAATGACGTGGGCCCACAAGGACTGCTTGAAGACATGGTGCCATGGGTGATTCGGAACCCTAGTTTCAGCAATCCCTCGAATTTTTTCTGCTCTTCTTCGTACCCTTCTAATTACTCCTCTCATTCCATTGGCTTCAATTCTAGCATTTAA 855 0.4596 MIETPMEEAVRTTWSEEDDLVREFLDAVTEDADYQSYYNTRKSSEEQAIMNRFISNMYSGPTITDIENALSVTSNQREQYFQHLSSSPHRVCMLERGLNLSRSENKYSLKIKCCGNGLSDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSSEEPDTVIVTYEGLHLHYAYPYFLMGQPGHQAHPPLKNCRPVFLQAQAHEEGRECEQGHTHTGQKPIETDAIFPSTNDVGPQGLLEDMVPWVIRNPSFSNPSNFFCSSSYPSNYSSHSIGFNSSI 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2534 284 ProSiteProfiles WRKY domain profile. 114 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci13g2534 284 SMART WRKY_cls 119 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci13g2534 284 SUPERFAMILY WRKY DNA-binding domain 117 177 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci13g2534 284 Gene3D WRKY domain 114 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci13g2534 284 Pfam WRKY DNA -binding domain 120 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci13g2534 284 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 53 184 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2534 Prci-Chr13 39551004 39553354 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2534 46 254 WRKY Transcription Factor Family AT5G43290 44.000 1.38e-50 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci13g2534 WRKY 1.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2534 - - gmx:100810459 271.166