Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2533 ATGATTGAGACACCTATGGAGGAAGCTGTGAGGACTACCTGGTCAGAAGAAGACGATCTTGTGAGAGAATTTTTAGATGCGGTAACAGAAGATGCAGATTATCAGAGTTACTACAACACGAGAAAATCAAGCGAGGAGCAAGCCATTATGAATAGGTTCATCTCCAACATGTACTCAGGACCTACCATTACAGATATTGAGAATGCCTTGTCAGTGACATCCAACCAAAGAGAGCAATATTTCCAGCACCTCTCATCATCACCACACAGAGGGTTGAATTTGAGCAGGAGTGAGAACAAGTATAGCCTGAAAATCAAGTGCTGCGGCAATGGGTTGAGCGATGATGGATATAAGTGGAGGAAGTACGGCCAGAAATCTATCAAGAACAGCCCCAATCCTAGGAGCTACTATAGGTGCACAAACCCAAGGTGCAGTGCCAAGAAGCAAGTGGAGAGATCCAGTGAAGAGCCTGACACTGTTATTGTCACTTATGAAGGGCTCCATCTCCACTATGCTTACCCATATTTTCTCATGGGCCAACCAGGTCATCAAGCCCATCCACCATTGAAAAACTGTAGGCCGGTCTTTTTACAAGCCCAAGCCCATGAGGAAGGCCGAGAATGTGAACAAGGTCATACTCATACCGGCCAGAAGCCCATAGAAACGGACGCTATCTTCCCCTCGACCAATGACGTGGGCCCACAAGGACTGCTTGAAGACATGGTGCCATGGGTGATTCGGAACCCTAGTTTCAGCAATCCCTCGAATTTTTTCTGCTCTTCTTCGTACCCTTCTAATTACTCCTCTCATTCCATTGGCTTCAATTCTAGCATTTAA 837 0.4612 MIETPMEEAVRTTWSEEDDLVREFLDAVTEDADYQSYYNTRKSSEEQAIMNRFISNMYSGPTITDIENALSVTSNQREQYFQHLSSSPHRGLNLSRSENKYSLKIKCCGNGLSDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSSEEPDTVIVTYEGLHLHYAYPYFLMGQPGHQAHPPLKNCRPVFLQAQAHEEGRECEQGHTHTGQKPIETDAIFPSTNDVGPQGLLEDMVPWVIRNPSFSNPSNFFCSSSYPSNYSSHSIGFNSSI 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2533 278 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 47 178 IPR044810 GO:0003700
Prci13g2533 278 SMART WRKY_cls 113 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci13g2533 278 Gene3D WRKY domain 108 166 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci13g2533 278 ProSiteProfiles WRKY domain profile. 108 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci13g2533 278 Pfam WRKY DNA -binding domain 114 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci13g2533 278 SUPERFAMILY WRKY DNA-binding domain 111 171 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2533 Prci-Chr13 39551004 39553355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2533 46 248 WRKY Transcription Factor Family AT5G43290 43.049 6.95e-49 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci13g2533 WRKY 1.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2533 - - gmx:100810459 262.692