Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2521 ATGAACCAGCCCATGGGTTTGCATGATGATGAACAAGAAGTTGTTGTTGATCGAACCACGGTGAAGGCTATAATAATAGACATGTTTGCTGCAGCACTGGAAGCCACGGCTGTTGTGGCTGAGTGGGCTTTAGCAGAACTCATGAAGAATCCGAGGGTGATGAAGAAGCTCCAAGATGAGATTCAAAATGTTGTGGGGATGGAGAGGATGGTTGAGGAGGCAGATTTATTGAAGCTAAGTTACTTGGATTTGACAGTGAAGGAGACCTTAAGACTTCATCCTGCTGGATCTCTGATTCCTCGAGAGGCCAGGGAAGACATCATAATTGATGGTTATTACATAGAAAAAAAGACAATGGTGCTGGTCAATACATGGGGCCTAGGTCGAGATCCTAAACTGTGGTCCGACAATGCAAATACATTTTATCCGGAGAGATTCGTAAATAGCGATGTGGATGTGAGAGGACATCACTTCCAACTCATACCATTTGGTTCAGGTCGGAGACGATGTCCTGGAATGAGAATGGGTCTGAGCATAATCAGATTTGTGGTGGCTCAGTTGGTTCATTGCTTTGATTGGGAGCTTCCTTATGGCATTAGCCCAGAAGAGTTGGATATGAATGAGAAATTTGGGCTCACAATACCTAAAGCTAAGCACTTGCTAGCAATGCCAACTTGTCGCTTAAATGCCCAGTCAAGTTCACATAGATGA 711 0.443 MNQPMGLHDDEQEVVVDRTTVKAIIIDMFAAALEATAVVAEWALAELMKNPRVMKKLQDEIQNVVGMERMVEEADLLKLSYLDLTVKETLRLHPAGSLIPREAREDIIIDGYYIEKKTMVLVNTWGLGRDPKLWSDNANTFYPERFVNSDVDVRGHHFQLIPFGSGRRRCPGMRMGLSIIRFVVAQLVHCFDWELPYGISPEELDMNEKFGLTIPKAKHLLAMPTCRLNAQSSSHR 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2521 236 PRINTS E-class P450 group I signature 160 170 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2521 236 PRINTS E-class P450 group I signature 170 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2521 236 PRINTS E-class P450 group I signature 20 37 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2521 236 PRINTS E-class P450 group I signature 40 66 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2521 236 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 163 172 IPR017972 GO:0005506|GO:0016705
Prci13g2521 236 Pfam Cytochrome P450 14 220 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2521 236 PRINTS P450 superfamily signature 84 95 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2521 236 PRINTS P450 superfamily signature 31 48 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2521 236 PRINTS P450 superfamily signature 161 170 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2521 236 PANTHER CYTOCHROME P450 93A3-LIKE 9 229 - -
Prci13g2521 236 SUPERFAMILY Cytochrome P450 9 227 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2521 236 FunFam Predicted protein 29 222 - -
Prci13g2521 236 Gene3D Cytochrome P450 4 231 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2521 Prci-Chr13 39472455 39474655 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2521 9 228 Monolignol Biosynthesis Gene Families AT4G36220 48.869 2.30e-74 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2521 - - pcin:129301104 316.235