Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2510 ATGGAAGAAGGTCAATGTTGGATTTGGACCAAAAGAAAGCACTCATCTTTGAGCTTTTATAATACTCACAACTTGACCTATGGCGATTCATGGGAAGAACAAGCCTTTGCGGAAGATGAGCGTTTTGGTGGATGCATATGGCCTCCAAGATCATACTCTTGCAGCTTTTGCAGCAGAGAGTTCAGGTCAGCCCAAGCTCTTGGTGGCCACATGAATGTTCACAGAAGAGATAGAGCTAGGCTAAAGCAACCCCCAAGTCCACACAAAACGGATGAAACCAGTCTTGATCATCAAAATTCTTTCACATCTTCCTTGGCTTATTCCAACACTAACCCTAATTCTGATGATCTTCGTATTCTTGCTTCTGAGGCTAAACTAGCCCCTCCATCTTTGATTCAAGAGAATTCCCCGCCATACGATTCTTGTATTTCCTGGTCAAACCTTGCAGCTGAACGAAGATTATATTCTCAAAAGACCGATCTTATTGGAACTAAGGATGATAAGATATCCAAGATAGTAGATACTGATTGTAATAAAGAAGAAGCTGATATTATGAGATGCAAGAGGAGAAGAATAACAGATGCTTCATCATTAATTCCATTGATCTCATCAAAATCAAGTTCAGTTGATAATAGGACTGGTCATATCAAGTCTCAGATGTTCGAGTTTATTAGTCCTAGTTCCAGTGAAGAGCTAGATCTGGAGCTAAGGCTTGGTTACAGTCCTCCCAAGACGTACGTGTATACATGCAGCCACTCGGTGACAAACCTAACAATATTAAACAAAAAAAGGCCAGCTTCAAGACCGCATACTTCTAGTCTTTCATTTAGCTTTAATCACATGAACTTTCAGTTTTTGTAG 861 0.403 MEEGQCWIWTKRKHSSLSFYNTHNLTYGDSWEEQAFAEDERFGGCIWPPRSYSCSFCSREFRSAQALGGHMNVHRRDRARLKQPPSPHKTDETSLDHQNSFTSSLAYSNTNPNSDDLRILASEAKLAPPSLIQENSPPYDSCISWSNLAAERRLYSQKTDLIGTKDDKISKIVDTDCNKEEADIMRCKRRRITDASSLIPLISSKSSSVDNRTGHIKSQMFEFISPSSSEELDLELRLGYSPPKTYVYTCSHSVTNLTILNKKRPASRPHTSSLSFSFNHMNFQFL 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2510 286 SMART c2h2final6 52 74 IPR013087 -
Prci13g2510 286 MobiDBLite consensus disorder prediction 75 95 - -
Prci13g2510 286 SUPERFAMILY beta-beta-alpha zinc fingers 49 78 IPR036236 -
Prci13g2510 286 ProSitePatterns Zinc finger C2H2 type domain signature. 54 74 IPR013087 -
Prci13g2510 286 MobiDBLite consensus disorder prediction 75 98 - -
Prci13g2510 286 Pfam C2H2-type zinc finger 52 76 - -
Prci13g2510 286 PANTHER OS07G0101800 PROTEIN 28 242 - -
Prci13g2510 286 Gene3D Classic Zinc Finger 49 111 - -
Prci13g2510 286 ProSiteProfiles Zinc finger C2H2 type domain profile. 52 79 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2510 Prci-Chr13 39420310 39423998 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2510 32 245 C2H2 Transcription Factor Family AT5G06070 36.937 8.30e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci13g2510 zf-C2H2_6 1.2e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2510 - - pcin:129291690 580.482