Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2505 ATGGAAGCCACTTCTATGATGAAGTTGCTGAAGAGCTTTTGTGATTGCTCACATTGGAATTATGCTGTATTTTGGAAGCTTAATCACCATTTTCCAATGACTTTGACCTGGGAAGACGGATACTATTGTGATTTGCAAACCAATGAGGCTGTGGAAAATATGTGGACGGAGGTGGCTTCTTCAAGTTGTGAAACTATACGTAGTTCTGAAGAGAGTTCTGTTAGATTACTCATGACTGAAATGTCTCGTCTGAAGTACATATTGGGAGAGGGGGCTGTCGGCAAAATAGCTCTTACTGGAGATCATTGTTGGATTTTATTTGAGGATATTCTTACTGGTAAATTCCAGACTAAGTTGAAAAATGAGTGTCTAAATGAATGGCTTCTTCAATTTGCATCAGCTATCAAGACTATCGTACTGGTACCCGTTCTTCCACAAGGAGTTTTGCAATTCGGCTCATTCAAAGCGGTTGCCGAAGATCTGGTCTTTGTTGCAAATGTCAAGGAGAAATTCAATTTCTTTCATCATGCAACAGCAGATACTCTGACATTGAGCTCAGATGAAAATATTCACTATTGGTCATTCTCGGCTCTAACAAACTGTCCTCTAGATAATTCTGATGTATCATCTCTTACAAACACTATCCTGACACGTGAACTTTTTGGTGGCAATTCACTTACTATAAATGAACTGAGGTTGAATCCAACTGTCCCATTGTCTATTCCGGTCGAAAGTGGTTCCAGGTCCAGGAAAAATGAGACCATTCCCCCATCAACTGGGGTGTCAAATGATGCTGGTCAGGTGGAAATCAAATCAAACCGAATGGAAGAAGTGATAGGGACCTGTTCTCCATGTGTCAATAACGTGGGAGTATTTGGACAGACATCTGAAGGACAATTTTCTTACTCTCACAATGACATGGCAGAACAATTTGGAGATACTGACACTGATCATGAAGAATGTAATAAGGTGGATAGTTTCAATTTTCCATTGGATTCTGAATTACACAAAGCACTAGGGCCTTTTACTAATAGACAAACTTCTGAACCTGGGTTGGAATATTTATCTGCTGAGGATACTTACAGTGCTAGCTCCACGTCGATATCTGGTGAAAAAGAGCTCGGTCATATTAGGGGCATAAAATTTTCAGAGGGACACAAATCAGAAAATCTTTTGGATGCAGTTCTTGGCAATTTATCCAGTGCCTCTGGTGATTCTTCATCGACTTTGCCAACCGTGTTTACTGCTTCCATTCATCCACAAAGTCATTCTGAGGGAAGCACTTTGATTGCGTATAATGGTGATTCTAGTAGCCATCTTCCATCTGCATTTGGGGCCAACATAGATGAATGTACTGACCTTCTTACGTTGGCATCTTTGGATGACAATTCAGGCATATTGCTTGATGGGGCACAGCAGGAATCTGTTCATGTTCATAGGCAGCCTAACAGTGGATCGAAACACCCTAGTATTGGCAAGAAAAGAGCCCGTGCAGGAAATACACCAAGGCCAAGACCAAGGGACAGACAGTTGATCATGGACCGGATGAAGGAGCTGAGGGAACTTGTCCCAGATGGTGCCAAGTGCAGCATTGACAACCTCTTAGATCGGGCCATAAAGCACATGCTATACTTGAGAGAAGTAACAGACCAGGCTGAGAAATTGAAACAGTTTGAGCATAAAGAGGTGCCCGAGCTGAAGCAGAAAATCAATGGCAATCATACTGGGAGGAGTTGCGCAATTGACTTTGGCAGTGAACTCCAAGTCTTCCCCATAGTCATAGAAGATCTTGAATGCCCTGGCCACATGCTTATAGAGGTGATATGCAGTGAGCATGGACTTTTCTTTGAGATTGCCCAAGTGATTCGACAGCTGGAGCTTACCATATTGAAAGGTGTTTTAGAAAGCAGTTCAAGCACTGCCTTGGCCCGTTTCATTGTTGAGGTTCCCAGAGGTTTTCACAGAATGGATGTTCTGTGCCCTTTGTTGCATCTTTTGCAGACTGGAACAAGCTCTGTCACATAG 2025 0.4247 MEATSMMKLLKSFCDCSHWNYAVFWKLNHHFPMTLTWEDGYYCDLQTNEAVENMWTEVASSSCETIRSSEESSVRLLMTEMSRLKYILGEGAVGKIALTGDHCWILFEDILTGKFQTKLKNECLNEWLLQFASAIKTIVLVPVLPQGVLQFGSFKAVAEDLVFVANVKEKFNFFHHATADTLTLSSDENIHYWSFSALTNCPLDNSDVSSLTNTILTRELFGGNSLTINELRLNPTVPLSIPVESGSRSRKNETIPPSTGVSNDAGQVEIKSNRMEEVIGTCSPCVNNVGVFGQTSEGQFSYSHNDMAEQFGDTDTDHEECNKVDSFNFPLDSELHKALGPFTNRQTSEPGLEYLSAEDTYSASSTSISGEKELGHIRGIKFSEGHKSENLLDAVLGNLSSASGDSSSTLPTVFTASIHPQSHSEGSTLIAYNGDSSSHLPSAFGANIDECTDLLTLASLDDNSGILLDGAQQESVHVHRQPNSGSKHPSIGKKRARAGNTPRPRPRDRQLIMDRMKELRELVPDGAKCSIDNLLDRAIKHMLYLREVTDQAEKLKQFEHKEVPELKQKINGNHTGRSCAIDFGSELQVFPIVIEDLECPGHMLIEVICSEHGLFFEIAQVIRQLELTILKGVLESSSSTALARFIVEVPRGFHRMDVLCPLLHLLQTGTSSVT 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2505 674 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 509 570 IPR036638 GO:0046983
Prci13g2505 674 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 496 545 IPR011598 GO:0046983
Prci13g2505 674 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 259 671 IPR043561 GO:0003700|GO:0006355
Prci13g2505 674 MobiDBLite consensus disorder prediction 473 488 - -
Prci13g2505 674 MobiDBLite consensus disorder prediction 473 509 - -
Prci13g2505 674 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 8 171 IPR025610 -
Prci13g2505 674 MobiDBLite consensus disorder prediction 242 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2505 Prci-Chr13 39363847 39370611 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2505 388 667 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 35.714 1.06e-45 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2505 - - lang:109360470 636.336