Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2503 ATGGAAGCCACTTCTATGATGAAGTTGCTGAAGAGCTTTTGTGATTGCTCACATTGGAATTATGCTGTATTTTGGAAGCTTAATCACCATTTTCCAATGACTTTGACCTGGGAAGACGGATACTATTGTGATTTGCAAACCAATGAGGCTGTGGAAAATATGTGGACGGAGGTGGCTTCTTCAAGTTGTGAAACTATACGTAGTTCTGAAGAGAGTTCTGTTAGATTACTCATGACTGAAATGTCTCGTCTGAAGTACATATTGGGAGAGGGGGCTGTCGGCAAAATAGCTCTTACTGGAGATCATTGTTGGATTTTATTTGAGGATATTCTTACTGGTAAATTCCAGACTAAGTTGAAAAATGAGTGTCTAAATGAATGGCTTCTTCAATTTGCATCAGCTATCAAGACTATCGTACTGGTACCCGTTCTTCCACAAGGAGTTTTGCAATTCGGCTCATTCAAAGCGGTTGCCGAAGATCTGGTCTTTGTTGCAAATGTCAAGGAGAAATTCAATTTCTTTCATCATGCAACAGCAGATACTCTGACATTGAGCTCAGATGAAAATATTCACTATTGGTCATTCTCGGCTCTAACAAACTGTCCTCTAGATAATTCTGATGTATCATCTCTTACAAACACTATCCTGACACGTGAACTTTTTGGTGGCAATTCACTTACTATAAATGAACTGAGGTTGAATCCAACTGTCCCATTGTCTATTCCGGTCGAAAGTGGTTCCAGGTCCAGGAAAAATGAGACCATTCCCCCATCAACTGGGGTGTCAAATGATGCTGGTCAGGTGGAAATCAAATCAAACCGAATGGAAGAAGTGATAGGGACCTGTTCTCCATGTGTCAATAACGTGGGAGTATTTGGACAGACATCTGAAGGACAATTTTCTTACTCTCACAATGACATGGCAGAACAATTTGGAGATACTGACACTGATCATGAAGAATGTAATAAGGTGGATAGTTTCAATTTTCCATTGGATTCTGAATTACACAAAGCACTAGGGCCTTTTACTAATAGACAAACTTCTGAACCTGGGTTGGAATATTTATCTGCTGAGGATACTTACAGTGCTAGCTCCACGTCGATATCTGGTGAAAAAGAGCTCGGTCATATTAGGGGCATAAAATTTTCAGAGGGACACAAATCAGAAAATCTTTTGGATGCAGTTCTTGGCAATTTATCCAGTGCCTCTGGTGATTCTTCATCGACTTTGCCAACCGTGTTTACTGCTTCCATTCATCCACAAAGTCATTCTGAGGGAAGCACTTTGATTGCGTATAATGGCATATTGCTTGATGGGGCACAGCAGGAATCTGTTCATGTTCATAGGCAGCCTAACAGTGGATCGAAACACCCTAGTATTGGCAAGAAAAGAGCCCGTGCAGGAAATACACCAAGGCCAAGACCAAGGGACAGACAGTTGATCATGGACCGGATGAAGGAGCTGAGGGAACTTGTCCCAGATGGTGCCAAGTGCAGCATTGACAACCTCTTAGATCGGGCCATAAAGCACATGCTATACTTGAGAGAAGTAACAGACCAGGCTGAGAAATTGAAACAGTTTGAGCATAAAGAGGTGCCCGAGCTGAAGCAGAAAATCAATGGCAATCATACTGGGAGGAGTTGCGCAATTGACTTTGGCAGTGAACTCCAAGTCTTCCCCATAGTCATAGAAGATCTTGAATGCCCTGGCCACATGCTTATAGAGGTGATATGCAGTGAGCATGGACTTTTCTTTGAGATTGCCCAAGTGATTCGACAGCTGGAGCTTACCATATTGAAAGGTGTTTTAGAAAGCAGTTCAAGCACTGCCTTGGCCCGTTTCATTGTTGAGGTTCCCAGAGGTTTTCACAGAATGGATGTTCTGTGCCCTTTGTTGCATCTTTTGCAGACTGGAACAAGCTCTGTCACATAG 1932 0.4244 MEATSMMKLLKSFCDCSHWNYAVFWKLNHHFPMTLTWEDGYYCDLQTNEAVENMWTEVASSSCETIRSSEESSVRLLMTEMSRLKYILGEGAVGKIALTGDHCWILFEDILTGKFQTKLKNECLNEWLLQFASAIKTIVLVPVLPQGVLQFGSFKAVAEDLVFVANVKEKFNFFHHATADTLTLSSDENIHYWSFSALTNCPLDNSDVSSLTNTILTRELFGGNSLTINELRLNPTVPLSIPVESGSRSRKNETIPPSTGVSNDAGQVEIKSNRMEEVIGTCSPCVNNVGVFGQTSEGQFSYSHNDMAEQFGDTDTDHEECNKVDSFNFPLDSELHKALGPFTNRQTSEPGLEYLSAEDTYSASSTSISGEKELGHIRGIKFSEGHKSENLLDAVLGNLSSASGDSSSTLPTVFTASIHPQSHSEGSTLIAYNGILLDGAQQESVHVHRQPNSGSKHPSIGKKRARAGNTPRPRPRDRQLIMDRMKELRELVPDGAKCSIDNLLDRAIKHMLYLREVTDQAEKLKQFEHKEVPELKQKINGNHTGRSCAIDFGSELQVFPIVIEDLECPGHMLIEVICSEHGLFFEIAQVIRQLELTILKGVLESSSSTALARFIVEVPRGFHRMDVLCPLLHLLQTGTSSVT 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2503 643 MobiDBLite consensus disorder prediction 242 266 - -
Prci13g2503 643 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 8 171 IPR025610 -
Prci13g2503 643 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 465 514 IPR011598 GO:0046983
Prci13g2503 643 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 267 640 IPR043561 GO:0003700|GO:0006355
Prci13g2503 643 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 478 539 IPR036638 GO:0046983
Prci13g2503 643 MobiDBLite consensus disorder prediction 443 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2503 Prci-Chr13 39363840 39370611 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2503 388 636 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 37.319 2.77e-45 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2503 - - gmx:100820605 612.453