Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2501 ATGGTGCAACAGACAGTTCCTGCAGTAATAACCTTAATTTTCATAATGGTGATCCTGCTATCTTGCGCCAGTGGCACGGCAGCACGAAGCTGCCGCAACTGCGGCTTGAATACTGTTCCGTACCCGTTAAGCACAGGACCCGGCTGTGGCCACCCGATGTACAATATAAAGTGCGTAACAAGCAAGTTGTGGCTTGACGCTCTTGGTGGATCATCTTATATGATCAAGTCCATCAATCCGATAACCCGACGGATCATTATACGACCTGCAAGCATGGCGCCGAAGACGTGTGTGTCCACAGACCTCAGCAGCGAAGGCATACGCTTGAACAAGAACCTTCCCTTTAAAATCACCAGCAATAACACCGTCTTTCTGTACAACTGTACGAACGCGATGCAGAAATCAAAACCGCCCATGGACTGTTCACTGAATGGCCTCTGTCATAGCTACATTAAGGACCATGCAGATTCCGGCGGAGCGTGCATGAGCGTGGAGCTATGTTGCAGCTTCAGGACTGGTAGGCCGTTCTCGGAGGACATGGTGAGGGTGCATGGAGGAGAGTGTGCTGCGTATCAGAGTTTTGTAAATCTCAATGAGGCAATGGCTCGGAAGCTGAAGAAATGGCCGGAGCCGGGAATAGAGCTGGAGTGGGTGATACCGGAGGAGCCAGTTTGCAAGGGGCCGACGGATTGCAAGGCGCTGTTGAACTCCACATGTTTGAAGGATCCGATCAATGCTCGGCAAATGAAGTGCCTTTGCAATGCTGGCTTCAAGTGGGACCCTGCCAATGGTTTGTGTCAACTAATCCATGGTCGACCAAAAAGTAAGTGTCGAAAAAAAAAAAAAGAAACAGAAACCTGCTAATCCGTGGGAGCATCCTTGGGAGCAATAGTATTCATTGCGCTGTTTGTGAGCATTATTCTGTACAAGCAGCATGACAAATCAAAGAGACAAGCCGAGATGAAGTTAAGGAAGCAAAAGGAACGAATCTTAAACGCGAAAGCCAACTGTGGGCTATCAGCCAGGATCTTCACAATGAGAGAAATAAAGAAGGCGTCCGACAACTTCTCCAAAGACAACCTCATCAGCACCGGCGGCTTCGGAGAAGTCTTCAAAGGAACCTTCGACGACGGAACCGTCATAGCCATCAAACGAGCCAAGCTCAGCAACACCAAAGCCCTCGACCAAATCCTGAACGAGGTTCGAATCCTCTGCCAAGTCAACCACCGTAACCTCGTCCGCCTCCTGGGTTGTTGTGTCGAACTAGACTACCAACCCCTTCTAATCTACGAATACATCCCCAACGGGACCCTCTTCGACCACCTCCACACGCACCGTTTTGATCGTCCTCTCCACTGGCTCCACAGGCTCAAGATCGCCCACCAAACAGCTCAAGCTCTATATTATCTTCACTCTTCGGCGTTGCCTCCTATATACCACAGGGACGTGAAATCAAGCAATATACTGTTGGACGATAGGTTTGATGCCAAAGTCTCAGACTTTGGGCTGTCTAGGCTTGTTGAGATAGCTGAAGCGAACAAGAGCCATATCTTCACTAGTGCACAGGGGACCCTAGGGTATCTCGACCCTGAGTATTATCGTAACTTTCAGCTTACTGATAAAAGTGATGTGTATAGCTTCGGGGTGGTGTTGTTGGAGATTCTCACACGTGAGAAGGCTATTGATTTTAACAGGAAAGAGGAGAATGTGAACTTGGTGGTTTATGGGAAGAAGATGATGAAGGAAGAGAGGCTTCTGGACATGGTGGATCCGGCGTTGAAGGATGGAGCGACCAACTTGGAGTTGGAGACGATGAAGTCTCTGGGGTTTCTTGCAGTGGCTTGCTTGGAAGAGCAGAGGCAGAATCGACCTTCCATGAAGGAAATTTCCGATGAGATTGAGTACCTAATTTGTATTCTTACTAATGACCTTCCCAAAACTTAA 1944 0.4871 MVQQTVPAVITLIFIMVILLSCASGTAARSCRNCGLNTVPYPLSTGPGCGHPMYNIKCVTSKLWLDALGGSSYMIKSINPITRRIIIRPASMAPKTCVSTDLSSEGIRLNKNLPFKITSNNTVFLYNCTNAMQKSKPPMDCSLNGLCHSYIKDHADSGGACMSVELCCSFRTGRPFSEDMVRVHGGECAAYQSFVNLNEAMARKLKKWPEPGIELEWVIPEEPVCKGPTDCKALLNSTCLKDPINARQMKCLCNAGFKWDPANGLCQLIHGRPKSKCRKKKKETETCXSVGASLGAIVFIALFVSIILYKQHDKSKRQAEMKLRKQKERILNAKANCGLSARIFTMREIKKASDNFSKDNLISTGGFGEVFKGTFDDGTVIAIKRAKLSNTKALDQILNEVRILCQVNHRNLVRLLGCCVELDYQPLLIYEYIPNGTLFDHLHTHRFDRPLHWLHRLKIAHQTAQALYYLHSSALPPIYHRDVKSSNILLDDRFDAKVSDFGLSRLVEIAEANKSHIFTSAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEILTREKAIDFNRKEENVNLVVYGKKMMKEERLLDMVDPALKDGATNLELETMKSLGFLAVACLEEQRQNRPSMKEISDEIEYLICILTNDLPKT 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2501 647 CDD STKc_IRAK 362 634 - -
Prci13g2501 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 478 490 IPR008271 GO:0004672|GO:0006468
Prci13g2501 647 Gene3D Transferase(Phosphotransferase) domain 1 433 639 - -
Prci13g2501 647 Pfam Protein kinase domain 357 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2501 647 ProSiteProfiles Protein kinase domain profile. 356 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2501 647 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 26 635 IPR045274 GO:0007166
Prci13g2501 647 SUPERFAMILY Protein kinase-like (PK-like) 340 638 IPR011009 -
Prci13g2501 647 Pfam Wall-associated receptor kinase galacturonan-binding 31 86 IPR025287 GO:0030247
Prci13g2501 647 FunFam Wall-associated receptor kinase-like 20 433 644 - -
Prci13g2501 647 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 328 432 - -
Prci13g2501 647 Coils Coil 309 336 - -
Prci13g2501 647 SMART serkin_6 356 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2501 647 Gene3D Phosphorylase Kinase; domain 1 326 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2501 Prci-Chr13 39330967 39333918 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2501 15 647 Receptor kinase-like Gene Family AT5G02070 54.559 0.0 693
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Prci13g2501 Pkinase 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2501 - - aprc:113862410 801.586