Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2488 ATGTATATACAACGCCATGGACGAGTCCAAGAGGCAACTGCGAAGCATTTTATGCAACAACTAGCTGCTGGCCTACAAGTTCTTCGGCACAATGATCTTATTCATAGAGATTTGAAACCACAGAATCTTCTTCTCACCAGAAATGATGACAAGTCAGATCTGAAGATTGCTGATTTTGGGTTTGCAAGATCTCTGCAACCTAGGGGTCTTGCAGAAACCTTGTGTGGTTCACCTCTCTACATGGCTCCAGAAATCATGCAACTACAGAAGTATGATGCTAAGGCAGATCTCTGGAGCGTGGGTGTGATCTTATTTCAGCTTGTTACAGGAAGAACACCATTTACTGGGAACGACCAAATGCAGTTACTACAGAACATTGTGAAATCAACTGAACTGCAGTTCCCATCTGATAATCAAAATCTGAGTCCTGAGTGTAAAGATTTATGTCAGAAATTGCTGCGCCGTAGTCCAGTGGAACGGCTAACTTTTGAAGAATTTTTTAATCATCCATTCCTTTTCCGGAAGCAGCCTGAACAGGATAAATCATTGAGACGTGGAAGTTCATCAAGGATGGTTGGTGAAATTTGCTCAACAGAGCCCCATCCTTTGACAAGGGCCAAGGAAAATCATCAAGAGGACTGCTTACCTTTCTTTTTGGATGATGATCCTTGTGGTCCTGAGGGAAACCCATCTTTTTCAAGGAAGAAATCCTCAATAAAGTCTACCTATGGATTTGACCTCAATACACAGCAAGATAGAGCAGACTCAGCATTTGCTACTTCTCATAACATAAATTTTACTTCCCAACAGCAACCTGAAAACAGTGCTATAAGGCTGGACAGCCATAGAACCTTAGCAAGAAATCTTGCTGTTCCTCTAGAATCTCTAGAACAGAGATTGGCAAACACCAGTTCAAGAGTTGCAGACTCACTAGAGAATATTGATCAAGATTATGTTCTTGTGTCTGGACCTCCTATGGATGTCTCATCATCTTCAGTGACTGCATCAAAGTCAAGCCATTTTCCATATAGATCAGGTGGTTCCCTGCTGGAGTCTTCTAATACAAGTGATAGAGTAAGTTCTCCATTGCCAATAATTGGTGCAGCTACCAGTAGCACATGTCAAATTGGAAGTTCAGAAAGTCAGGACTCTGCTCCAGGGACTTCACATGTGTCAATGGATACAGGAGACGAGCAGCCATCAGCTGACTGCATAACTAGGATAAAATCATTGCAACAGTGTGCATCTACCATAGCTGAGTTAGTTAATGAGAAGATGGAGGCAGGAAAGCAGCTGGAAGCATTCTCCATTCAGCTTGTTATTCTTGCAATCTGGAAGCAAGCACTGCACATTTGCCATGCACAGGCTGCATCTGCCATGGAAGGGAGTCCGAGTCAAGAAACCAGTAAATGTAGGAGCACCAACATGAAGCACGGCAGTTCTGATTCGGAAGAATGCCTTGACGGAAATTTGCAAGGGGCAAACGATATTCTATCTCAGATTGAAAGTGAGTTTCTGAGGGAGTTTGAGCGTGCTGAAGAACTGGCTAAGGCTGTTGAGCCTGGAAATACAGAGATGCCAGATGCAATGGAGACAATATTTCAGTCTGCCCTTGCTTTTGGGAGACATGGGGGTGTAGAAGAGCTCATGGGCGATGTGGGTAGTGCAGCTGCCTTGTATTCGAAGGCTGTGCGACTACTGCTGTTCCTTCTAGTGGAAGCTCCATCCCTCATTTTAAACCCTCCATTTTCACTGACTAACTCGGATCGATACAGGCTTCGGAGTTACATCGATATTCTAAACAACAGGCAAGGCTATTCCAGGTCTCAGCGAATGACGCTGCTGAAATGTGATGGAACGCAAGGCGGCCTCAAGAACAAGTTTTAG 1887 0.4404 MYIQRHGRVQEATAKHFMQQLAAGLQVLRHNDLIHRDLKPQNLLLTRNDDKSDLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGVILFQLVTGRTPFTGNDQMQLLQNIVKSTELQFPSDNQNLSPECKDLCQKLLRRSPVERLTFEEFFNHPFLFRKQPEQDKSLRRGSSSRMVGEICSTEPHPLTRAKENHQEDCLPFFLDDDPCGPEGNPSFSRKKSSIKSTYGFDLNTQQDRADSAFATSHNINFTSQQQPENSAIRLDSHRTLARNLAVPLESLEQRLANTSSRVADSLENIDQDYVLVSGPPMDVSSSSVTASKSSHFPYRSGGSLLESSNTSDRVSSPLPIIGAATSSTCQIGSSESQDSAPGTSHVSMDTGDEQPSADCITRIKSLQQCASTIAELVNEKMEAGKQLEAFSIQLVILAIWKQALHICHAQAASAMEGSPSQETSKCRSTNMKHGSSDSEECLDGNLQGANDILSQIESEFLREFERAEELAKAVEPGNTEMPDAMETIFQSALAFGRHGGVEELMGDVGSAAALYSKAVRLLLFLLVEAPSLILNPPFSLTNSDRYRLRSYIDILNNRQGYSRSQRMTLLKCDGTQGGLKNKF 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2488 628 ProSiteProfiles Protein kinase domain profile. 1 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2488 628 SUPERFAMILY Protein kinase-like (PK-like) 2 173 IPR011009 -
Prci13g2488 628 SMART serkin_6 1 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2488 628 Pfam Protein kinase domain 2 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2488 628 MobiDBLite consensus disorder prediction 459 476 - -
Prci13g2488 628 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 2 537 IPR045269 GO:0004674|GO:0006914
Prci13g2488 628 Coils Coil 293 313 - -
Prci13g2488 628 Gene3D Transferase(Phosphotransferase) domain 1 1 214 - -
Prci13g2488 628 MobiDBLite consensus disorder prediction 459 485 - -
Prci13g2488 628 MobiDBLite consensus disorder prediction 374 399 - -
Prci13g2488 628 MobiDBLite consensus disorder prediction 374 396 - -
Prci13g2488 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 33 45 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2488 Prci-Chr13 39236513 39245243 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2488 3 181 CBL-interacting serine-threonine protein kinases AT2G30360 37.705 5.21e-34 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Prci13g2488 Pkinase 9.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2488 K08269 - gmx:100791596 953.74