Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2487 ATGGCTCAGTCGTCGGGACGGGGCGGTTTGGTGGGAGACTACATCATCGGGAAGCAAATTGGGTCCGGGTCTTTCTCGGTGGTGTGGCATGGGAGGCACCGTGTTCATGGAACTGAGGTTGCCATTAAAGAGATCGTCACCGGTCGGCTTAACAACAAGTTGCAGGACAGTCTCTTGTCAGAGATTTTTATCCTGAAAGGGATTAACCATCCTAACATAATTCGTTTGCACGAATTAATTAAGGTTCCTGGGAAGATATATCTTGTGCTAGAGTACTGTAAAGGGGGTGATCTCTCTATGTATATACAACGCCATGGACGAGTCCAAGAGGCAACTGCGAAGCATTTTATGCAACAACTAGCTGCTGGCCTACAAGTTCTTCGGCACAATGATCTTATTCATAGAGATTTGAAACCACAGAATCTTCTTCTCACCAGAAATGATGACAAGTCAGATCTGAAGATTGCTGATTTTGGGTTTGCAAGATCTCTGCAACCTAGGGGTCTTGCAGAAACCTTGTGTGGTTCACCTCTCTACATGGCTCCAGAAATCATGCAACTACAGAAGTATGATGCTAAGGCAGATCTCTGGAGCGTGGGTGTGATCTTATTTCAGCTTGTTACAGGAAGAACACCATTTACTGGGAACGACCAAATGCAGTTACTACAGAACATTGTGAAATCAACTGAACTGCAGTTCCCATCTGATAATCAAAATCTGAGTCCTGAGTGTAAAGATTTATGTCAGAAATTGCTGCGCCGTAGTCCAGTGGAACGGCTAACTTTTGAAGAATTTTTTAATCATCCATTCCTTTTCCGGAAGCAGCCTGAACAGGATAAATCATTGAGACGTGGAAGTTCATCAAGGATGGTTGGTGAAATTTGCTCAACAGAGCCCCATCCTTTGACAAGGGCCAAGGAAAATCATCAAGAGGACTGCTTACCTTTCTTTTTGGATGATGATCCTTGTGGTCCTGAGGGAAACCCATCTTTTTCAAGGAAGAAATCCTCAATAAAGTCTACCTATGGATTTGACCTCAATACACAGCAAGATAGAGCAGACTCAGCATTTGCTACTTCTCATAACATAAATTTTACTTCCCAACAGCAACCTGAAAACAGTGCTATAAGGCTGGACAGCCATAGAACCTTAGCAAGAAATCTTGCTGTTCCTCTAGAATCTCTAGAACAGAGATTGGCAAACACCAGTTCAAGAGTTGCAGACTCACTAGAGAATATTGATCAAGATTATGTTCTTGTGTCTGGACCTCCTATGGATGTCTCATCATCTTCAGTGACTGCATCAAAGTCAAGCCATTTTCCATATAGATCAGGTGGTTCCCTGCTGGAGTCTTCTAATACAAGTGATAGAGTAAGTTCTCCATTGCCAATAATTGGTGCAGCTACCAGTAGCACATGTCAAATTGGAAGTTCAGAAAGTCAGGACTCTGCTCCAGGGACTTCACATGTGTCAATGGATACAGGAGACGAGCAGCCATCAGCTGACTGCATAACTAGGATAAAATCATTGCAACAGTGTGCATCTACCATAGCTGAGTTAGTTAATGAGAAGATGGAGGCAGGAAAGCAGCTGGAAGCATTCTCCATTCAGCTTGTTATTCTTGCAATCTGGAAGCAAGCACTGCACATTTGCCATGCACAGGCTGCATCTGCCATGGAAGGGAGTCCGAGTCAAGAAACCAGTAAATGTAGGAGCACCAACATGAAGCACGGCAGTTCTGATTCGGAAGAATGCCTTGACGGAAATTTGCAAGGGGCAAACGATATTCTATCTCAGATTGAAAGTGAGTTTCTGAGGGAGTTTGAGCGTGCTGAAGAACTGGCTAAGGCTGTTGAGCCTGGAAATACAGAGATGCCAGATGCAATGGAGACAATATTTCAGTCTGCCCTTGCTTTTGGGAGACATGGGGGTGTAGAAGAGCTCATGGGCGATGTGGGTAGTGCAGCTGCCTTGTATTCGAAGGCTGTGCGACTACTGCTGTTCCTTCTAGTGGAAGCTCCATCCCTCATTTTAAACCCTCCATTTTCACTGACTAACTCGGATCGATACAGGCTTCGGAGTTACATCGATATTCTAAACAACAGGCAAGGCTATTCCAGGTCTCAGCGAATGACGCTGCTGAAATGTGATGGAACGCAAGGCGGCCTCAAGAACAAGTTTTAG 2184 0.446 MAQSSGRGGLVGDYIIGKQIGSGSFSVVWHGRHRVHGTEVAIKEIVTGRLNNKLQDSLLSEIFILKGINHPNIIRLHELIKVPGKIYLVLEYCKGGDLSMYIQRHGRVQEATAKHFMQQLAAGLQVLRHNDLIHRDLKPQNLLLTRNDDKSDLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGVILFQLVTGRTPFTGNDQMQLLQNIVKSTELQFPSDNQNLSPECKDLCQKLLRRSPVERLTFEEFFNHPFLFRKQPEQDKSLRRGSSSRMVGEICSTEPHPLTRAKENHQEDCLPFFLDDDPCGPEGNPSFSRKKSSIKSTYGFDLNTQQDRADSAFATSHNINFTSQQQPENSAIRLDSHRTLARNLAVPLESLEQRLANTSSRVADSLENIDQDYVLVSGPPMDVSSSSVTASKSSHFPYRSGGSLLESSNTSDRVSSPLPIIGAATSSTCQIGSSESQDSAPGTSHVSMDTGDEQPSADCITRIKSLQQCASTIAELVNEKMEAGKQLEAFSIQLVILAIWKQALHICHAQAASAMEGSPSQETSKCRSTNMKHGSSDSEECLDGNLQGANDILSQIESEFLREFERAEELAKAVEPGNTEMPDAMETIFQSALAFGRHGGVEELMGDVGSAAALYSKAVRLLLFLLVEAPSLILNPPFSLTNSDRYRLRSYIDILNNRQGYSRSQRMTLLKCDGTQGGLKNKF 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2487 727 Pfam Protein kinase domain 15 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2487 727 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Prci13g2487 727 Gene3D Transferase(Phosphotransferase) domain 1 7 314 - -
Prci13g2487 727 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 5 636 IPR045269 GO:0004674|GO:0006914
Prci13g2487 727 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Prci13g2487 727 CDD STKc_ATG1_ULK_like 20 270 - -
Prci13g2487 727 MobiDBLite consensus disorder prediction 558 575 - -
Prci13g2487 727 SUPERFAMILY Protein kinase-like (PK-like) 11 272 IPR011009 -
Prci13g2487 727 FunFam Serine/threonine-protein kinase ATG1 6 312 - -
Prci13g2487 727 FunFam Aurora kinase A 9 96 - -
Prci13g2487 727 Coils Coil 392 412 - -
Prci13g2487 727 SMART serkin_6 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2487 727 MobiDBLite consensus disorder prediction 472 498 - -
Prci13g2487 727 MobiDBLite consensus disorder prediction 472 495 - -
Prci13g2487 727 MobiDBLite consensus disorder prediction 558 584 - -
Prci13g2487 727 ProSiteProfiles Protein kinase domain profile. 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2487 Prci-Chr13 39236513 39245730 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2487 10 280 CBL-interacting serine-threonine protein kinases AT2G30360 37.906 1.89e-57 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Prci13g2487 Pkinase 3.9e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2487 K08269 - gmx:100791596 1110.13