Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2458 ATGCTTCAAATTCGGCTTAGCAAGCTACCAGCCTCAGAAGGTTCCGCAGGGGTGAGGTCCGCACCTGTTGAGACTGCAATTGCATGTCCCGACCATCTCGTCCTGGCTGACCTGCCTGTAGCAGAGGGTATTGGTGCAGCCACTGCCACTTCCCTTATTAAGACTTTAGGATGGAGGTCCCGCCGTCAGCTTGGCAAGAGAGTTCATCTCTGTGTTCGTTGTGATTTCCCCATAGCTATATATGGACGATTGCTGAATCACAGGAAAGACTGA 273 0.5165 MLQIRLSKLPASEGSAGVRSAPVETAIACPDHLVLADLPVAEGIGAATATSLIKTLGWRSRRQLGKRVHLCVRCDFPIAIYGRLLNHRKD 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2458 90 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 88 IPR013083 -
Prci13g2458 90 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED 1 84 IPR040383 GO:0016567|GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2458 Prci-Chr13 38909590 38911175 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2458 1 85 C2H2 Transcription Factor Family AT5G01160 67.442 7.87e-36 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2458 K15685 - pcin:129291867 182.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g2458 13 38909590 38911175 Prci13g2458 13 38909590 38911175 ECH