Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2451 ATGACAGCTGCTATGGACTTGAATGCCTCGCCCGTTCCAGAGGAAGATGAGGACGCATTTGAGGGGCATGTAGAAGACTTCGTTGCACAAGAAGAACGCATAGAAAGTGCAGTTGATATAGCACGACGGGAGCGTGAAGAAAGAAAAAGACGATTGAAAAGAGAACGTCCAGATGATAGATCTGTTTATGCATCACCATCACCTGGTTATGACCAGCTATTTCAAACGAAGTCCCTTAAATCATATGATAGAAATAGGCTTCCTCCAGGGTGGTTGGATTGCCCTTCATTTGGTCAAGAAATTTTTTGCATGATACCTTCTAAGGTTCCACTTGGTGAATCGTTCAATGATTGCATTGCTCCTGGTAAAAGATACTCATTCAAACAAGTGATACATCAACAAAGAGTTTTAGGGAGAAAACTTGGTTTGGTGATTGATTTGACAAATACTTCTCGATACTATCCAGTGTCAGATCTAAAGAAAGAGGGTATCAAGCATGTAAAGATACAATGCAAGGGACGTGATTCTGTACCTGATAATTTATCTGTGAATCAATTCGTCCATGAGGTTACACAATTTCTATCACGTCAAAAACACACAAAGAAATATATACTTGTCCATTGTACACATGGGCATAATCGTACAGGATACATGATCACCCATTATCTCATGCGTGCCATGTCAATGTCTGTCACACAGGCAATAAAAATATTTTCTGATGCACGCCCTCCAGGAATCTACAAACCTGATTACATTGATGCTTTGTACACATTCTATCATGAAAAAAGGCCTGACATGGTGGTTTGTCCTCCTACTCCAGAGTGGAAGAGATCTTCTGAATTTGATCTTAATGGTGAAGCGGTGCCAGATGATGATGATGATGATGATGGAATACCAGGCCCTCCTTTGGATGGGAACCATGAGACAGATGTGTTGATGACAAATGATGATGTCTTGGGAGATGAGATACCTAATGATCAGCAAGATTCATTCAGGCAGTTCTGTTATCAGTCCCTTAAATTGGGTGCTGGGGCTAGAGGACATACACAATTTCCAGGGTCACACCCAGTTTCTCTGAACAGGGAAAATTTGCAGTTGTTACGGCAGCGCTATTATTATGCAACATGGAAAGCTGATGGCACACGATATATGATGCTGATAACAATGGATGGATGCTACTTAATTGATAGAAGCTTCAATTTTCGAAGGGTCCAAATGAGGTTTCCGTGCAGGGGTACAAATGATGTGTTGGCTGAGAAGACTCACCACTACACATTACTTGATGGGGAGATGATCATTGATACTTTGCCTGATTCAAAGAAGCAGGAGAGGAGATACCTTATATATGATCTGATAGCGATTAACCAAGTATCAGTAATAGAGCGACCGTTTTATGAAAGGTGGAAGATGCTTGAGAAAGAAGTGATTGAACCTAGGAATTGGGAGCGACATAATATATATCAGAGCAGAAACCCTTACTATAGATATGACATGGAACCATTCAGGGTGAGGAGAAAAGATTTTTGGTTGCTCTCTACAGTCACAAAGCTCTTAACGGAATTCATTCCAAGACTCTCTCATGCTGCTGATGGCCTCATATTTCAGGGCTGGGATGATCCTTATGTACCACGTACTCATGAAGGCCTCTTGAAGTGGAAATATCCTGAGATGAATTCAGTTGATTTCCTCTTTGAGGTTGACGATGTTGGGGAGAAACTTTTTCTTTACGAACGAGGAAAGAAGAAACTCATGGATGGGAATAGGGTAGCATTCAAAGATGGTTCGGATCCCTCATTTTATTCTGGAAAGATCATAGAGTGTTCTTGGGACTCTGATAACCAGGAATGGGAATTCATGCGAGTGAGAACTGATAAATCAACTCCAAATGAGTTTAATACTTTCAGGAAGGTGATGCGAAGTATAAAAGACAACATTACGGAGGATATTTTGTTGAATGAGATCTCCGAGATTATTCGCCTTCCCATGTATGCTGACAGGATAAGAATTGACAGTAAAGCACACCATCATACTAACGCAACACGAAGAAGGTGA 2052 0.4098 MTAAMDLNASPVPEEDEDAFEGHVEDFVAQEERIESAVDIARREREERKRRLKRERPDDRSVYASPSPGYDQLFQTKSLKSYDRNRLPPGWLDCPSFGQEIFCMIPSKVPLGESFNDCIAPGKRYSFKQVIHQQRVLGRKLGLVIDLTNTSRYYPVSDLKKEGIKHVKIQCKGRDSVPDNLSVNQFVHEVTQFLSRQKHTKKYILVHCTHGHNRTGYMITHYLMRAMSMSVTQAIKIFSDARPPGIYKPDYIDALYTFYHEKRPDMVVCPPTPEWKRSSEFDLNGEAVPDDDDDDDGIPGPPLDGNHETDVLMTNDDVLGDEIPNDQQDSFRQFCYQSLKLGAGARGHTQFPGSHPVSLNRENLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRSFNFRRVQMRFPCRGTNDVLAEKTHHYTLLDGEMIIDTLPDSKKQERRYLIYDLIAINQVSVIERPFYERWKMLEKEVIEPRNWERHNIYQSRNPYYRYDMEPFRVRRKDFWLLSTVTKLLTEFIPRLSHAADGLIFQGWDDPYVPRTHEGLLKWKYPEMNSVDFLFEVDDVGEKLFLYERGKKKLMDGNRVAFKDGSDPSFYSGKIIECSWDSDNQEWEFMRVRTDKSTPNEFNTFRKVMRSIKDNITEDILLNEISEIIRLPMYADRIRIDSKAHHHTNATRRR 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2451 683 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 87 277 IPR029021 -
Prci13g2451 683 PIRSF mRNA_capping_HCE 73 683 IPR017074 GO:0004484|GO:0006370|GO:0140818
Prci13g2451 683 MobiDBLite consensus disorder prediction 45 61 - -
Prci13g2451 683 FunFam mRNA capping enzyme family protein 552 660 - -
Prci13g2451 683 Pfam mRNA capping enzyme, C-terminal domain 558 650 IPR013846 -
Prci13g2451 683 FunFam mRNA capping enzyme, putative 314 551 - -
Prci13g2451 683 Gene3D - 554 645 IPR012340 -
Prci13g2451 683 ProSitePatterns Tyrosine specific protein phosphatases active site. 206 216 IPR016130 GO:0016311|GO:0016791
Prci13g2451 683 SMART dsp_5 121 261 IPR020422 GO:0006470|GO:0008138
Prci13g2451 683 FunFam mRNA capping enzyme family protein 83 297 - -
Prci13g2451 683 Gene3D DNA ligase/mRNA capping enzyme 314 553 - -
Prci13g2451 683 PANTHER MRNA-CAPPING ENZYME 82 665 - -
Prci13g2451 683 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 315 554 - -
Prci13g2451 683 MobiDBLite consensus disorder prediction 45 69 - -
Prci13g2451 683 Pfam mRNA capping enzyme, catalytic domain 355 553 IPR001339 GO:0004484|GO:0005524|GO:0006370
Prci13g2451 683 ProSiteProfiles Dual specificity protein phosphatase domain profile. 114 265 IPR020422 GO:0006470|GO:0008138
Prci13g2451 683 ProSiteProfiles ATP-dependent DNA ligase family profile. 437 581 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Prci13g2451 683 CDD Adenylation_mRNA_capping 344 554 IPR001339 GO:0004484|GO:0005524|GO:0006370
Prci13g2451 683 SUPERFAMILY Nucleic acid-binding proteins 556 667 IPR012340 -
Prci13g2451 683 MobiDBLite consensus disorder prediction 283 310 - -
Prci13g2451 683 MobiDBLite consensus disorder prediction 285 299 - -
Prci13g2451 683 Gene3D Protein tyrosine phosphatase superfamily 65 282 IPR029021 -
Prci13g2451 683 MobiDBLite consensus disorder prediction 1 21 - -
Prci13g2451 683 Pfam Dual specificity phosphatase, catalytic domain 139 259 IPR000340 GO:0008138|GO:0016311
Prci13g2451 683 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 184 253 IPR000387 GO:0016311|GO:0016791
Prci13g2451 683 CDD RNA_5'-triphosphatase 90 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2451 Prci-Chr13 38855122 38866766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2451 1 673 Protein tyrosine phosphatase (PTP) family AT3G09100 70.545 0.0 964
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2451 K13917 - gmx:100776633 1192.56