Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2444 ATGCCTTCATCCTCCACCACCGTCGTCTCCAAATGCACTGTCTACCCTAGCCAGCCCTCCTTCCTCAAATCCCTCAAGCTCTCCGTCTCCGACCTCCCCATGCTCTCTTGTCACTACATTCAAAAGGGAATCCTCCTCCCTCCTCCTCCTTTCTCCTTCCCTGACCTCCTCCACTCTCTCAAGCGCTCTCTTTCCGTTACTCTCTCCTTTTTTCCCGCCCTCGCCGGCCGCCTCTTCACTGATTCCGACGGCTACGTTCATATTCTGTGCAACGACGCTGGCGTCGATTTCATCCACGCCTCCGCCAAACACCTCGCCACTCCTTCCATCCTTTACTCTCCCACCCTCACTGACGTCCCATGTTGCTTCAAGCAGTTCTTCGCCTACAGCAAGACTATCTCCTACTCTGGCCACACTCTCCCCCTCGTCGCCGTCCAAGTCACCCAACTTGCCGATGCGGTCTTCATCGGATGCACTGTTAATCACGCCGTTGTCGACGGCACTTCCCTCTGGCATTTCTTCAACACCTTCGCTGAGATCTGCAAAGGAGCCAAGATTTCCAATTCCCCCGACTTCACTCGCGACACCGTTTTCAACTCCAGCGCCGTGCTTAAAGTTCCGGTCGGCGGCCCCAAGGTCACCTTCGACGACGAGCAGCCGTTGAGGGAAAGAGTGTTCCATTTCAGCAGGGAGGCTATTCAAAAACTTAAGCTCAGAGCTAATAACTGTGGCGCGAACGGTTTCGCGGGTTCTACGGAGTTCGTTGAAAAGCGAGTTAACGGCGAGATCACGCCTGTCACGGCGAATGGCATAATCCCTAAGACGGAAGAGATCTCGTCGTTTCAATCGTTGTCCGCACAGCTGTGGCGTTCGGTGACACGTGCGAGGAAGTTGGACCAGCGAAAAGCGTCGACGTTTCGCATGGCGGTGAACTGCCGGTGCCGTCTGGAGCCGAAGATGGACGCTTATTACTTTGGGAACGCGATTCAGAGCATCCCGACCGTTGCAGAGGTCGGAGAGATTCTGTCTAGGGATCTACGGTGGTGTGCTGATCTGCTGCACAAAAACGTCGTCGCACACGACGACGCTACGGTGCGACGTGGCATAGAGGATTGGGAGAAGGCACCCAGGTTGTTTCCGCTGGGAAACTTCGATGGTGCTTCAATGACCATGGGTAGCTCTCCGCGTTTTCCCATGTACGACAATGACTTTGGGTGGGGCCGACCATTGGCCATTCGGAGCGGGAAGGCCAACAAGTTTGACGGCAAGATCTCAGCGTTCCCAGGGAGGGAAGGAAACGGGAGCGTTGACTTGGAAGTCGTTTTGGCGCCCGAAACGATGGCGGGGCTTGAAAACGACATGGAGTTCATGCAGTACGTCACGGGAACGGTGTGA 1395 0.5556 MPSSSTTVVSKCTVYPSQPSFLKSLKLSVSDLPMLSCHYIQKGILLPPPPFSFPDLLHSLKRSLSVTLSFFPALAGRLFTDSDGYVHILCNDAGVDFIHASAKHLATPSILYSPTLTDVPCCFKQFFAYSKTISYSGHTLPLVAVQVTQLADAVFIGCTVNHAVVDGTSLWHFFNTFAEICKGAKISNSPDFTRDTVFNSSAVLKVPVGGPKVTFDDEQPLRERVFHFSREAIQKLKLRANNCGANGFAGSTEFVEKRVNGEITPVTANGIIPKTEEISSFQSLSAQLWRSVTRARKLDQRKASTFRMAVNCRCRLEPKMDAYYFGNAIQSIPTVAEVGEILSRDLRWCADLLHKNVVAHDDATVRRGIEDWEKAPRLFPLGNFDGASMTMGSSPRFPMYDNDFGWGRPLAIRSGKANKFDGKISAFPGREGNGSVDLEVVLAPETMAGLENDMEFMQYVTGTV 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2444 464 Gene3D - 6 207 IPR023213 -
Prci13g2444 464 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 458 - -
Prci13g2444 464 Gene3D - 219 457 IPR023213 -
Prci13g2444 464 Pfam Transferase family 7 457 - -
Prci13g2444 464 SUPERFAMILY CoA-dependent acyltransferases 58 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2444 Prci-Chr13 38741253 38742897 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2444 60 452 Monolignol Biosynthesis Gene Families AT5G48930 26.478 4.57e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2444 - - qsa:O6P43_016644 696.812