Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2426 ATGAGCCACCGTAGAGCAAGCTCCAGAATCTTGGCATTACAAATCCTTAGTGGATCGCTTCTTTTGTGCATGAGCTCAACATTTAGCTCTGCAACTATGACCCTACAAGGAACCGAAACTGATTTTCAAGCTTTGCTTGACTTGAAGAGTCGGATATCTCAAGATCCATTCAAAATAATGAGTTCCTGGAACAACTCCATCCATCACTGCAAATGGGTAGGAATCACCTGCAACATATCCACCGGACGGGTGGTGCAACTGAGTCTTGGACAACAGAGATTGACTGGTACAATTCCCTCTTCAATAGGAAACCTCACATTCCTCAGAATACTTAATCTAAGCATCAACAGCTTCCACGGTGAATTTCCTAATGAAGTGGGACGTCTGCTATACCTTCAAACTCTAACGGTCACCCTTAATTACTTCAGCGGAGGTGTACCAAGTAATCTAAGTCACTGTAAGGAACTGAGGATTTTATTTGCAGGTAATAACAATTTAACAGGAAAAATCCCTACATGGATAGGGAATTTTTCTTCTTTATCTCATATCGGGCTTGGAGTGAACAACTTCCATGGAAGCATACCAAAAGAGATGGGCTATTTATCAGGCTTGAAATTTCTGGGACTCAATGGTAATTACCTATCTGGTACAGTTCCTATTTCTATTTACAACATTTCCTCTATATTTTACTTCGCTGTTGGTCAAAACAATCTGCAAGGTATTATACCATCTGATATTGGATTTAGTCTTCCTAACCTTGAGATATTTGGCGGAGCGGTCAACAATTTCACCGGTATTGTTCCAGTATCATTGGTAAATGCTTCGAGGCTGCAATTACTTGATTTTGCTGAAAATGCTCTAACTGGAAAACTGCCTGAGAACTTGGGAGTTTTGAAAAGTTTATTTTGGCTCAACTTTGATGACAATAGACTTGTATCTAATGGAAAATATTATTATGGCCTTAGTTTTCTTACTTCTCTGGTCAATTGCACTGAACTTGAAGTTTTAGGTCTTAGAGGAAATATGTTTGGAGGAGAATTGCCCAATTCAATAACTAATCTTTCAAGCAGATTAAGAAAATTAACGTTAGGTGAAAATGCATTATATGGAAGCATCCCTGCTGCCATTGGAAATCTTGCTAGTTTGGAAAGTCTAGGATTGGAAGGAAACCTTCTAGCCAGCAGTGTCCCTGATGGAATGGGCAAACTCCAAAATTTAGGCCGTTTGAATTTGAATGGCAACAACCTTTCAGGAACAATCCCTTTGTCTCTGGGAAACTTGACTTCATTAACACAGCTCTTCATGGAGGATAACAACTTTGTGGGAAGTATACCTCCAAGCCTTGGAAATTGTCAGAACCTTCTAGTACTAAGTCTTTATAACAACAAACTCAGCGGCACCATACCGAGACAAGTGCTTGGCATTTCTTCACTTTCAGTGTACTTGGACGTCTCTAATAATGTTCTTACAGGACCTTTACCAGATGAAGTGGGAAATTTACATGGTCTAACAAAGCTGGTACTCTCAGAGAATAACTTTTCCGGTGTCATTCCATCTTCTCTTGGAAAATGTGTCAGCTTGGAGCAGTTGTACTTGCAGGGTAATTTGTTTGCAGGAGAGATTCCTAAGAGTTTAGAGGGACTGAGAGGTTTGGAAGACATAGATCTTTCACGTAACAACTTGTCTGGGAAGATTCCTGAATTCCTCAATGAGTTTGTAGCTCTCAAACATCTCAATCTTTCTTACAATGACCTTGAGGGTGAAGTGCCAAAGGGAGGAATCTTTACAAATGCAACTTCCACTTCATTATACGGAAACAGCAAGCTCTGCGGTGGTATCCCAGAATTTAATCTATCTACATGTACAACCACATCGACAAGAAAATCTCTCGCGCTGAAGGTGGCAATCCCTCTTGCTAGCACTTTGGTGTTTGCCATCCTTCTATCATGCTTTCTTGCACTCTTTTTCATGGCAAAAAGAGTGAAGAAAAGATCAGAAGAAAATGCAATCAACACAAGGGATTTGAACCCAGAAATTTCTTACGCAGAAGTGGCTAGATGCACTAGTGGTTTCTCTCAAGAAAACTTGATCGGTTCGGGAAGATTTGGTTCGGTATACAAAGGAACTCTCACTAGAGACAACGCATTAGTTGCAGTGAAAGTATTCAATCTTCATCAAAGAGGAGCTTCAAGGAGTTTCACTGACGAATGCAAAGCTTTGAGAAGAATAAAGCACCGGAACCTTCTCAAGATCGTAACTGCTGTATCAAGCATTGATCACCAAGGTAATGACTTCAAAGCTCTGGTGTTCGAGTTCATGTCTAATGGGAATCTAGATGATTGGATACATCTAAGAGATAATGTGCAACGGGAGAGCAAGAGATTGACATTTGTCCAAAGACTGAACATAGCAATTGATGTTGCTTGTGCACTGGAATATCTCCACCGTTTTTGTCAAACACCTATCGTACATTGTGATATAAAACCAAGCAATGTACTGCTTGACAATGATTTGGTTGCCCATGTTGGTGACTTTGGACTAGCAAGCCTTCTATACGAAGAATCAAGCGACTCTTCCATTTCACAAGAACACTCAACCATGTCAGGTGGCCTAAAGGGTTCTATTGGGTATATTCCACCAGAGTATGGTATGGGCGGACAACCTTCAACACTAGGAGATATCTACAGCTATGGGATACTATTACTGGAGATTTTCACAGGAAAAAGACCCACAAATGATGAATTTGAAGGCGGGATGGAAATTCACCAGTATGTGGCAATGGCTTTACCCAATGAAGCCTTGGAGATAGCTGATCCTTCCTTGCTACCTGAAGAAGAAGATAAGGATGAAGAGATATACTTGGAGGAGAGAGCAATAAGGAAGGAAAATCGAAGGAGGAGAGTAACAGAGGATTGCCTGAGTTCATTGATGCAAGTGGGAGTATCTTGCTCTGCAAGTCTGCCATCAGAGAGGCCGCAGACTATGACTGTGGTTGTTAACAAACTCCAAGCAATCAAGAAAGTGTACATCGCCAGATAA 3039 0.4087 MSHRRASSRILALQILSGSLLLCMSSTFSSATMTLQGTETDFQALLDLKSRISQDPFKIMSSWNNSIHHCKWVGITCNISTGRVVQLSLGQQRLTGTIPSSIGNLTFLRILNLSINSFHGEFPNEVGRLLYLQTLTVTLNYFSGGVPSNLSHCKELRILFAGNNNLTGKIPTWIGNFSSLSHIGLGVNNFHGSIPKEMGYLSGLKFLGLNGNYLSGTVPISIYNISSIFYFAVGQNNLQGIIPSDIGFSLPNLEIFGGAVNNFTGIVPVSLVNASRLQLLDFAENALTGKLPENLGVLKSLFWLNFDDNRLVSNGKYYYGLSFLTSLVNCTELEVLGLRGNMFGGELPNSITNLSSRLRKLTLGENALYGSIPAAIGNLASLESLGLEGNLLASSVPDGMGKLQNLGRLNLNGNNLSGTIPLSLGNLTSLTQLFMEDNNFVGSIPPSLGNCQNLLVLSLYNNKLSGTIPRQVLGISSLSVYLDVSNNVLTGPLPDEVGNLHGLTKLVLSENNFSGVIPSSLGKCVSLEQLYLQGNLFAGEIPKSLEGLRGLEDIDLSRNNLSGKIPEFLNEFVALKHLNLSYNDLEGEVPKGGIFTNATSTSLYGNSKLCGGIPEFNLSTCTTTSTRKSLALKVAIPLASTLVFAILLSCFLALFFMAKRVKKRSEENAINTRDLNPEISYAEVARCTSGFSQENLIGSGRFGSVYKGTLTRDNALVAVKVFNLHQRGASRSFTDECKALRRIKHRNLLKIVTAVSSIDHQGNDFKALVFEFMSNGNLDDWIHLRDNVQRESKRLTFVQRLNIAIDVACALEYLHRFCQTPIVHCDIKPSNVLLDNDLVAHVGDFGLASLLYEESSDSSISQEHSTMSGGLKGSIGYIPPEYGMGGQPSTLGDIYSYGILLLEIFTGKRPTNDEFEGGMEIHQYVAMALPNEALEIADPSLLPEEEDKDEEIYLEERAIRKENRRRRVTEDCLSSLMQVGVSCSASLPSERPQTMTVVVNKLQAIKKVYIAR 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2426 1012 PANTHER OS04G0122200 PROTEIN 53 199 - -
Prci13g2426 1012 Pfam Protein kinase domain 692 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2426 1012 FunFam LRR receptor-like serine/threonine-protein kinase EFR 662 772 - -
Prci13g2426 1012 Gene3D Ribonuclease Inhibitor 40 152 IPR032675 -
Prci13g2426 1012 Gene3D Ribonuclease Inhibitor 248 315 IPR032675 -
Prci13g2426 1012 Gene3D Phosphorylase Kinase; domain 1 672 772 - -
Prci13g2426 1012 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 773 1012 - -
Prci13g2426 1012 Gene3D Ribonuclease Inhibitor 153 247 IPR032675 -
Prci13g2426 1012 SMART LRR_typ_2 105 129 IPR003591 -
Prci13g2426 1012 SMART LRR_typ_2 427 451 IPR003591 -
Prci13g2426 1012 SMART LRR_typ_2 500 524 IPR003591 -
Prci13g2426 1012 SMART LRR_typ_2 572 597 IPR003591 -
Prci13g2426 1012 SMART LRR_typ_2 379 403 IPR003591 -
Prci13g2426 1012 Pfam Leucine rich repeat N-terminal domain 40 78 IPR013210 -
Prci13g2426 1012 Gene3D Transferase(Phosphotransferase) domain 1 773 1010 - -
Prci13g2426 1012 SUPERFAMILY L domain-like 39 311 - -
Prci13g2426 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 822 834 IPR008271 GO:0004672|GO:0006468
Prci13g2426 1012 ProSitePatterns Protein kinases ATP-binding region signature. 697 720 IPR017441 GO:0005524
Prci13g2426 1012 ProSiteProfiles Protein kinase domain profile. 691 1010 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2426 1012 FunFam LRR receptor-like serine/threonine-protein kinase EFR 319 627 - -
Prci13g2426 1012 SUPERFAMILY L domain-like 356 611 - -
Prci13g2426 1012 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 38 193 - -
Prci13g2426 1012 Gene3D Ribonuclease Inhibitor 316 629 IPR032675 -
Prci13g2426 1012 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 195 291 - -
Prci13g2426 1012 SMART serkin_6 691 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2426 1012 Pfam Leucine rich repeat 482 536 IPR001611 GO:0005515
Prci13g2426 1012 SUPERFAMILY Protein kinase-like (PK-like) 672 1002 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2426 Prci-Chr13 38554920 38559065 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2426 39 1009 Receptor kinase-like Gene Family AT3G47570 43.881 0.0 764
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci13g2426 Pkinase 3.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2426 - - gmx:106794146 1198.73