Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2412 ATGGCTGGCAAGCGAAAGGCTGCTGCTCTAAAGGCTGACAAGAGCAGTGCAAAAATGACCAAGAAGGCGAGGAATGCCAAGAAAGATCCCAACAAACCAAAAAGACCGCCCAGTGCTTTTTTTGTCTTCCTTGAGGAATTCAGAAAGGCCTTTAAGGCAGAAAATCCTAATGTGAAGGCTGTATCAGCTGTGGGGAAAGCTGGAGGAGAGAAATGGAAATCTATGACCACTGCTGAGAAAGCTCCATATGAAGCCAAGGCTGTAAAAAAGAAATCTGAGTTTGAAAAACTCATGAAGGCATATAATAAAAAGCAGACAAACTCAGGAGAATCAGATAAGTCGAAGTCTGAAGTGAATGATGAAGAGGATGAAGCCAGTGGAGAGGAAACGCACCAAGAAGAGGAGGATGAAGAAGAGAATGATGAAGACGGGGACGATGAAGAGGATGACTGA 453 0.4415 MAGKRKAAALKADKSSAKMTKKARNAKKDPNKPKRPPSAFFVFLEEFRKAFKAENPNVKAVSAVGKAGGEKWKSMTTAEKAPYEAKAVKKKSEFEKLMKAYNKKQTNSGESDKSKSEVNDEEDEASGEETHQEEEDEEENDEDGDDEEDD 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2412 150 MobiDBLite consensus disorder prediction 83 120 - -
Prci13g2412 150 MobiDBLite consensus disorder prediction 1 37 - -
Prci13g2412 150 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 33 102 IPR009071 -
Prci13g2412 150 MobiDBLite consensus disorder prediction 65 150 - -
Prci13g2412 150 Pfam HMG (high mobility group) box 33 102 IPR009071 -
Prci13g2412 150 Gene3D High mobility group box domain 15 118 IPR036910 -
Prci13g2412 150 CDD HMG-box_AtHMGB1-like 34 94 - -
Prci13g2412 150 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 6 133 IPR031061 -
Prci13g2412 150 MobiDBLite consensus disorder prediction 121 150 - -
Prci13g2412 150 MobiDBLite consensus disorder prediction 7 34 - -
Prci13g2412 150 SMART hmgende2 32 103 IPR009071 -
Prci13g2412 150 SUPERFAMILY HMG-box 26 107 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2412 Prci-Chr13 38474504 38477162 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Prci13g2412 HMG_box 6.6e-23 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2412 K25507 - aew:130764348 183.726