Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2407 ATGGGTTTTTCCCAAGAAAGACGAAGAAAACAAAGGCGGAGGTCTTTCAAGGATTCCCTTAAAGCTCTTGAAGCTGATATCCAATTCGCCAATGCCCTAGCTTCTGATTATCCAAGAGACTTTGATGGTGCTTGCCTCCAAATGAGATTATCCTACAGTCCAGCCGCTCAATTTCTCCTTGTACTTTTTCAGTGGACTGATTGCCACCTTGCTGGAGCCTTTGGATTGCTTAGAATTCTGGTATACAAGGCATATGATAATGGGAAGACCACAATGACTGTTTATGAAAGAAAAGCAAGTCTGAAGGAGTTCTATGGTGTAATCTTTCCCTCCTTATTGCAACTACAAAGAGGGATCACTGATGCTGAAGACAGGCGACAAAAAGATTTATGTGCTACAAAGTATAAGTCGGTAGAAGCGATGAACAAACGAGAGATGTCTGAAATTGACATAGAGGGAGAAAATGAATGCGACATTTGCATGGAGATGAACAGAAGGGTTGTGTTGCCTGTCTGCAGCCACTCAATGTGCATGAAATGTTACCGAGACTGGTTTCCCTTAAAAAAAGGAAAGGAAAGGAAAGGAAAGGAAAAGAGGTTATTAGCTGATGCTCTTAGGCGAGCACGATCTCAGTCTTGCCCGTTCTGCCGGGGAAATCTGACGAGAGTTAACTCAGGTGACCTTTGGATCTACGTGAGCAGCAATGATATCGAGGACTTAGATTCAATTATCAAGGAGAATGTAAATAGGCTATTTATGTACATTGAGAAGTTGCCGCGCCTAGTTCCAGATCCTAGTTTCGCATCTTATCTTCAGCATTGGTGA 825 0.4267 MGFSQERRRKQRRRSFKDSLKALEADIQFANALASDYPRDFDGACLQMRLSYSPAAQFLLVLFQWTDCHLAGAFGLLRILVYKAYDNGKTTMTVYERKASLKEFYGVIFPSLLQLQRGITDAEDRRQKDLCATKYKSVEAMNKREMSEIDIEGENECDICMEMNRRVVLPVCSHSMCMKCYRDWFPLKKGKERKGKEKRLLADALRRARSQSCPFCRGNLTRVNSGDLWIYVSSNDIEDLDSIIKENVNRLFMYIEKLPRLVPDPSFASYLQHW 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2407 274 SMART ring_2 157 216 IPR001841 -
Prci13g2407 274 PANTHER RING FINGER PROTEIN 41, 151 14 272 - -
Prci13g2407 274 SUPERFAMILY RING/U-box 152 221 - -
Prci13g2407 274 ProSiteProfiles Zinc finger RING-type profile. 157 217 IPR001841 -
Prci13g2407 274 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 139 226 IPR013083 -
Prci13g2407 274 ProSitePatterns Zinc finger RING-type signature. 172 181 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2407 Prci-Chr13 38465863 38469068 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2407 K25840 - zju:107430836 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g2407 13 38465863 38469068 Prci12g0200 12 1529254 1532718 CCT
Prci13g2407 13 38465863 38469068 Prci13g2407 13 38465863 38469068 ECH