Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2400 ATGGGTCCTTGGGTTTTTGCGTTGGCCTTAGTGGGACTTACGCCACTAGCTGAACGCGTCAGCTTCTTGACAGAACAAGTTTCTTACCACACGGGCCCAACAGTTGGAGGACTCTTAAATGCAACATTTGGCAATGTCACAGAACTCATAATAGCAATATTTGCTCTCAGAAATAATAAAATAGCTGTGCTCAAGTATTCTCTCTTGGGTTCAATCCTTTCAAACCTTCTTTTAGTTCTTGGAACCTCCCTCTTCAGTGGTGGAATAGCAAACATTAGAGGAGAACAAAAATTTGATAGGAAACAGGTAGATGTGAACTCACTTATGCTGCTGCTGGCATTTTTGTGCCACTTGCTGCCTTTGCTGTTCAGATATTCTGGTATCTCAGCTGCTCTTGATACAGGCCCATCTCTCCACTTGTCAAGAACTGCAAGTATTGTGATGCTGATAGCATATTTTGCTTACCTTGTCTTTCAACTTTGGACCCATCGCCAGTTATTTCAAGCTGAGGATGAAGAAGATAATGATAATGTTGCAGAAGTAGCTGTGATAGGATTTTGGAGTGGGTTTGCTTGGCTTGCTGGATTGACTGTACTCATTGCCATCTTGTCTCAATTTGTGGTGAACACAATTGAGGGTACTTCAGATTCATGGAGCCTGTCTGTCAGCTTCCTTAGCATCATCTTGTTGCCAATAGTTGGCAATGCAACTGAACATGCAGGGGCAATCATATTTGCTTTGAAGAACAAGCTAGACATCTCATTAGGTGTTGCTTTAGGTTCTGCAACTCAGATTTCCATGTTCGTGGTTCCCCTGTGTGTCGTCATTGCTTGGATAATGGGTATCAGAATGGACCTTGACTTCAATCTCCTTGAGACCGGTTCTCTTGCTTTGGCTATTTTAGTCCCATCTTTCACTTTACAGGATGGGACTTCTAACTACATGAAAGGCCTTGTTCTCCTGCTCTGCTACGTTGTTATTGGGGCATGCTTCTTTGTACAAAGAACACCACCCAACCAGGCTGATGTTCCAAACATGATCCTTAAACCTCCAACTGAAGCAGCTTGA 1068 0.4316 MGPWVFALALVGLTPLAERVSFLTEQVSYHTGPTVGGLLNATFGNVTELIIAIFALRNNKIAVLKYSLLGSILSNLLLVLGTSLFSGGIANIRGEQKFDRKQVDVNSLMLLLAFLCHLLPLLFRYSGISAALDTGPSLHLSRTASIVMLIAYFAYLVFQLWTHRQLFQAEDEEDNDNVAEVAVIGFWSGFAWLAGLTVLIAILSQFVVNTIEGTSDSWSLSVSFLSIILLPIVGNATEHAGAIIFALKNKLDISLGVALGSATQISMFVVPLCVVIAWIMGIRMDLDFNLLETGSLALAILVPSFTLQDGTSNYMKGLVLLLCYVVIGACFFVQRTPPNQADVPNMILKPPTEAA 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2400 355 NCBIfam calcium/proton exchanger 3 332 - -
Prci13g2400 355 NCBIfam calcium/proton exchanger 5 332 IPR004798 GO:0006816|GO:0015369
Prci13g2400 355 FunFam Vacuolar cation/proton exchanger 177 333 - -
Prci13g2400 355 FunFam Vacuolar cation/proton exchanger 33 176 - -
Prci13g2400 355 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 3 336 IPR004713 GO:0006812|GO:0008324|GO:0016020
Prci13g2400 355 Gene3D - 177 332 IPR044880 -
Prci13g2400 355 Gene3D - 33 172 IPR044880 -
Prci13g2400 355 Pfam Sodium/calcium exchanger protein 189 327 IPR004837 GO:0016020|GO:0055085
Prci13g2400 355 Pfam Sodium/calcium exchanger protein 3 161 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2400 Prci-Chr13 38436068 38440646 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2400 3 340 Antiporters AT2G38170 70.930 5.57e-164 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2400 K07300 - qsa:O6P43_016607 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g2400 13 38436068 38440646 Prci13g2400 13 38436068 38440646 ECH