Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2398 ATGAGTACGCTTCAACAAGATGCATTGCTCATGGAGAATGGCCACATCAAGGGTTTGAGCAGGGAGCTGAGGCATGGCAGGACTGCTCATAACATGTCCTCTTCTTCCTTGCGCAAGAAATCCGACTTAACCCTTGTTTCCAAGGTTCAGTGGTGTTTGCTCAGGAATTTGCTCGTCAATTTCCAAGAGGTCATCCTTGGGACCAAGCTGTCGATTCTCTTTCTTGTGATTCCCCTTGCCATCGTCGCCGAAGTCTACAGGTTCGGTCGACCTTGGGTTTTTGCGTTGGCCTTAGTGGGACTTACGCCACTAGCTGAACGCGTCAGCTTCTTGACAGAACAAGTTTCTTACCACACGGGCCCAACAGTTGGAGGACTCTTAAATGCAACATTTGGCAATGTCACAGAACTCATAATAGCAATATTTGCTCTCAGAAATAATAAAATAGCTGTGCTCAAGTATTCTCTCTTGGGTTCAATCCTTTCAAACCTTCTTTTAGTTCTTGGAACCTCCCTCTTCAGTGGTGGAATAGCAAACATTAGAGGAGAACAAAAATTTGATAGGAAACAGGTAGATGTGAACTCACTTATGCTGCTGCTGGCATTTTTGTGCCACTTGCTGCCTTTGCTGTTCAGATATTCTGGTATCTCAGCTGCTCTTGATACAGGCCCATCTCTCCACTTGTCAAGAACTGCAAGTATTGTGATGCTGATAGCATATTTTGCTTACCTTGTCTTTCAACTTTGGACCCATCGCCAGTTATTTCAAGCTGAGGATGAAGAAGATAATGATAATGTTGCAGAAGTAGCTGTGATAGGATTTTGGAGTGGGTTTGCTTGGCTTGCTGGATTGACTGTACTCATTGCCATCTTGTCTCAATTTGTGGTGAACACAATTGAGGGTACTTCAGATTCATGGAGCCTGTCTGTCAGCTTCCTTAGCATCATCTTGTTGCCAATAGTTGGCAATGCAACTGAACATGCAGGGGCAATCATATTTGCTTTGAAGAACAAGCTAGACATCTCATTAGGTGTTGCTTTAGGTTCTGCAACTCAGATTTCCATGTTCGTGGTTCCCCTGTGTGTCGTCATTGCTTGGATAATGGGTATCAGAATGGACCTTGACTTCAATCTCCTTGAGACCGGTTCTCTTGCTTTGGCTATTTTAGTCCCATCTTTCACTTTACAGGATGGGACTTCTAACTACATGAAAGGCCTTGTTCTCCTGCTCTGCTACGTTGTTATTGGGGCATGCTTCTTTGTACAAAGAACACCACCCAGCTGA 1284 0.4439 MSTLQQDALLMENGHIKGLSRELRHGRTAHNMSSSSLRKKSDLTLVSKVQWCLLRNLLVNFQEVILGTKLSILFLVIPLAIVAEVYRFGRPWVFALALVGLTPLAERVSFLTEQVSYHTGPTVGGLLNATFGNVTELIIAIFALRNNKIAVLKYSLLGSILSNLLLVLGTSLFSGGIANIRGEQKFDRKQVDVNSLMLLLAFLCHLLPLLFRYSGISAALDTGPSLHLSRTASIVMLIAYFAYLVFQLWTHRQLFQAEDEEDNDNVAEVAVIGFWSGFAWLAGLTVLIAILSQFVVNTIEGTSDSWSLSVSFLSIILLPIVGNATEHAGAIIFALKNKLDISLGVALGSATQISMFVVPLCVVIAWIMGIRMDLDFNLLETGSLALAILVPSFTLQDGTSNYMKGLVLLLCYVVIGACFFVQRTPPS 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2398 427 FunFam Vacuolar cation/proton exchanger 265 421 - -
Prci13g2398 427 NCBIfam calcium/proton exchanger 56 420 - -
Prci13g2398 427 Gene3D - 121 262 IPR044880 -
Prci13g2398 427 Gene3D - 263 420 IPR044880 -
Prci13g2398 427 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 20 424 IPR004713 GO:0006812|GO:0008324|GO:0016020
Prci13g2398 427 Pfam Sodium/calcium exchanger protein 277 415 IPR004837 GO:0016020|GO:0055085
Prci13g2398 427 Pfam Sodium/calcium exchanger protein 92 249 IPR004837 GO:0016020|GO:0055085
Prci13g2398 427 NCBIfam calcium/proton exchanger 74 420 IPR004798 GO:0006816|GO:0015369
Prci13g2398 427 FunFam Vacuolar cation/proton exchanger 121 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2398 Prci-Chr13 38435836 38440646 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2398 12 427 Antiporters AT2G38170 69.014 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2398 K07300 - zju:107405517 595.89