Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2389 ATGGATCAGATTCATCTTCATCATCATCTTCGTCCCCAGCACCAGCAACAGCATCATCATCTTCCTTCTCAAGTACAGCCTCTCGGTATTACCATAAACGTCGATGCGAGTAGTGGCGTCGTTGTCGATAGGTTACCTCAGTGGAGCGTCCAAGAGACGAAGGACTTTCTGGCTATTCGAGCAGAGCTGGATCAGAATTTTATGGAGACCAAGAGGAACAAGCAGTTGTGGCAGTTTATCTCTAACGCCATGAGCGAAAAGGGTTATCTTCGAAGCCCGGAGCAGTGCAAGTGCAAATGGAAAAACCTCGTCACCAGGTACAAGGGATGTGAAACAGCGGGGCCAGAAACTGTAAGGCAGCAATTCCCATTCTACAGCGAGCTTCAAGCGATTTTCACGGCGAGGATGCAGAGAATGGTGTGGGCGGAGGCGGCGGAAGGAGCTGGATCGTCGAAGAAGAAGACGGCGTCGGATGACGACGAAGACGACAATGAAGAGATGAGCATGGATCTGCAGGGAGAGACGAAGAGCTCCAGAAAGAAGGTGAAAAGAAGCAGAAGTAACAGCAGCGAGAGCAGCGGTAAGAGGTTGAAGGAAATACTGGAAGAGTTCATGAGGCAACAAATACAGATAGAGTCACGGTGGATGGAAGCATTTGAAGCGAGAGAGAAGGAAAGGATGATGAAGGAGATGGAGTGGAGAGAATCCATGAAAGCTTTGGAGAATGAGAGGACGGTGATGGAGCAGAGATGGAGAGAGAGAGAACAAGAGAGGAGTATAAGGGAAGAAGCTAGGGCTGAGAGAAGAGACGCGTTAATCACTGCTCTCCTTAACAAGCTCACAAGACAAGAAATGTAG 858 0.4907 MDQIHLHHHLRPQHQQQHHHLPSQVQPLGITINVDASSGVVVDRLPQWSVQETKDFLAIRAELDQNFMETKRNKQLWQFISNAMSEKGYLRSPEQCKCKWKNLVTRYKGCETAGPETVRQQFPFYSELQAIFTARMQRMVWAEAAEGAGSSKKKTASDDDEDDNEEMSMDLQGETKSSRKKVKRSRSNSSESSGKRLKEILEEFMRQQIQIESRWMEAFEAREKERMMKEMEWRESMKALENERTVMEQRWREREQERSIREEARAERRDALITALLNKLTRQEM 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2389 285 Gene3D - 48 109 - -
Prci13g2389 285 CDD GT1 46 111 - -
Prci13g2389 285 MobiDBLite consensus disorder prediction 1 22 - -
Prci13g2389 285 Pfam Myb/SANT-like DNA-binding domain 47 131 IPR044822 -
Prci13g2389 285 ProSiteProfiles Myb-like domain profile. 48 104 IPR001005 -
Prci13g2389 285 MobiDBLite consensus disorder prediction 169 194 - -
Prci13g2389 285 PANTHER FI21293P1 30 283 - -
Prci13g2389 285 FunFam Zinc finger and SCAN domain-containing 20 48 109 - -
Prci13g2389 285 Coils Coil 230 257 - -
Prci13g2389 285 MobiDBLite consensus disorder prediction 144 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2389 Prci-Chr13 38261997 38264319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2389 19 282 Trihelix Transcription Factor Family AT2G38250 54.579 5.69e-73 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Prci13g2389 Myb_DNA-bind_4 5.2e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2389 - - qsu:112009211 268.47