Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2342 ATGTTGGACTTATTTGTTTCCACATTGTCCTTCATTTCGCCCATAAATATATTCAGAGAGCTAGGCCACAGATCACCATATCAACTCATAAACAAGAGTCTCTCTTTCTCTCTGCTAGTGTGTAGAAACCAGGATAGAAAGAAGATGGAGCCTGAGATACTTGAGCCGTCTTGGTCATTCTATGAAAACATAAGCTCAACTTTTGACCATGATGAGTCTTTTGACTTCAATATTGACACTCCTTTGTTCACTACTTCAGAGGATACTTGTTCTGAGATTACCTCCATCGTTCCCTTTCCTTCCACCATCTTCTCCAATGATCATGTCTATTACCCAATTGATCAGGACATCCTTCAATTCCCATCGTTGGTGGATGATTTCTTCATGGATCTTGATGCTTTTGATCTCCCTTTGAGTTCTCAGTGTCAGGGTATCCATATCTTTCCATCACATAACTTGTGTTCTGAGAAAGAAGATGCTTGGAGTCCAACCCCATCCATGCAATCGGACATGTCTACAGCAGTACAAGCACAATCATCACTGATCATACCAGAGGAAGACATGGAGATGGAGAACCAGTTGAGTCTTCCTCATCTTCTGGAAGCCGTTGGAGAAGCCTTAGAGCAAGGACAGAACACACTCGCCCAAGTGATTCTGAGATGCATCAGCCACAAAGTAAGCCCTCTAGGTGATCCTCTTGAGCGTCTCTCATTCAATTTGTCCCAAAATCATGATACTTCAGAACAAGGGACTTTCCTCAAACAGGAGGCGCGCAAGAACTTCCACAACGCTTTCAAGGCAATCTACCAAGGCCTCCCACAAGGCAGAATCGCGCATTTTGCAGCCAATTCAGCAATTTTAGAATCCATTCCAGAGGATTCAGAAGTCATACACATAATAGACTTCGATATGGGAGAAGGGGTTCAATGGCCTCCACTAATGGAGACTATTGCTCATCAACATAAAACATTGAAATTAACGTCAATCGAATGGGAAGAAGAGGATAGTCTTGATACCCATTTTGTTTCAACCCAATGGAAATTTGAAGAAATCAGACAGAACCTGTACGAGCATGGCAAGTCATGTGGTTTGAAGTTGAAGGTGGAGGAACAGAGTATCGAGGAATTGGTGACGGAGCTCAAGAAATTGAACAAAAGGGGTAGAAATGGAAATGGAAAGCGAAATTTCGTGGCCTTCAATTGCATGGTGGGTCTTCCACATATGGGGAGGGTCAGAAGCAGAAGACAGGTGTTGGAATTTCTGAGGGTAGCAAAGGATTTCATCAAACGCTCATCTTCCAACAGGGGAATCATAACTTTGGGTGATGGAGAAGCCTGTGAGAAACTGAGAAACAGTACCAACTTCAGGTCATTCTTTAGTGGCCATTTGGTGCATTACCATGCTTTGTTAGAATCGATAGAATCAAATTTCCCAATTCAATTCTCAGAGGCAAGATCAACAATGGAGAGTCTATTCGTGGCACCATGCATATCGTGCGAGGATTGGTTGCAGAAATGGGAGATGAGAGATGATCGGACTCTTCAATCAGAAACAGAGTTAGAGGGTCGAAGCTTGAGGGAAGAGACATTAATGGAGGTTGGAGAAATGCTGAGAGGAATCGAAGGTTCGTATAAGGTCAAGATTGAAGGCAATAATGGCAATGAAATGGTTTTGGAATGGGAAGGAACGCAGCTTCTAAGAATTTCGAAGTGGGGAAATTAA 1722 0.4292 MLDLFVSTLSFISPINIFRELGHRSPYQLINKSLSFSLLVCRNQDRKKMEPEILEPSWSFYENISSTFDHDESFDFNIDTPLFTTSEDTCSEITSIVPFPSTIFSNDHVYYPIDQDILQFPSLVDDFFMDLDAFDLPLSSQCQGIHIFPSHNLCSEKEDAWSPTPSMQSDMSTAVQAQSSLIIPEEDMEMENQLSLPHLLEAVGEALEQGQNTLAQVILRCISHKVSPLGDPLERLSFNLSQNHDTSEQGTFLKQEARKNFHNAFKAIYQGLPQGRIAHFAANSAILESIPEDSEVIHIIDFDMGEGVQWPPLMETIAHQHKTLKLTSIEWEEEDSLDTHFVSTQWKFEEIRQNLYEHGKSCGLKLKVEEQSIEELVTELKKLNKRGRNGNGKRNFVAFNCMVGLPHMGRVRSRRQVLEFLRVAKDFIKRSSSNRGIITLGDGEACEKLRNSTNFRSFFSGHLVHYHALLESIESNFPIQFSEARSTMESLFVAPCISCEDWLQKWEMRDDRTLQSETELEGRSLREETLMEVGEMLRGIEGSYKVKIEGNNGNEMVLEWEGTQLLRISKWGN 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2342 573 ProSiteProfiles GRAS family profile. 187 572 IPR005202 -
Prci13g2342 573 Coils Coil 366 386 - -
Prci13g2342 573 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 178 529 IPR005202 -
Prci13g2342 573 Pfam GRAS domain family 198 571 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2342 Prci-Chr13 37847845 37849890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2342 191 356 GRAS Transcription Factor Family AT2G01570 29.444 6.18e-12 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci13g2342 GRAS 4.4e-37 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2342 - - pcin:129291421 1141.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g2342 13 37847845 37849890 Prci13g2342 13 37847845 37849890 ECH