Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2332 ATGACCAAAGGAAGTCTAGCATCATTCCTACACGCTAGGGGCCCGGAAATAGTGATAGACTGGCCAACAAGGATGAGAATAGCCCTTGGAGTGACACGGGGCCTATGCTACCTGCATACACAAGAGAACATGGTACATGGGAATCTCACTTCTAGCAACGTGCTACTGGATGAGCAGACAAATGCCCATATTACAGACTTCGGTCTCTCAAGACTAATGACCACGTCAGCAAACAGCAACATCATCGCAACTGCAGGAAACCTTGGTTATAATGCACCAGAGCTCACAAAGACCAAGAAACCAAACACAAAAACTGATGTCTATAGCGTTGGTGTCATCATTTTGGAGCTCTTAACTGGAAAACCACCTGGTGAGCCGACCAATGGCTTGGACTTGCCACAGTGGGTAGCATCCATAGTGAAGGAAGAATGGACTAATGAAGTGTTTGATTTGGAGCTCATGAGGGATGCACCAACTATAGGTGATGAACTGCTCAATACTCTGAAATTGGCTCTTCATTGTGTGGATCCATCCCCAGCTGCTAGGCCTGAAGTTCAGCAGATTCTTCAGCAACTAGAAGAGATCAAGCCAGACTTAGCTTCTGCTACTTCTGTGGATGACGGAGCAAAAGTCCCAGAAACTGAATAA 648 0.463 MTKGSLASFLHARGPEIVIDWPTRMRIALGVTRGLCYLHTQENMVHGNLTSSNVLLDEQTNAHITDFGLSRLMTTSANSNIIATAGNLGYNAPELTKTKKPNTKTDVYSVGVIILELLTGKPPGEPTNGLDLPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPAARPEVQQILQQLEEIKPDLASATSVDDGAKVPETE 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2332 215 Pfam Protein tyrosine and serine/threonine kinase 1 192 IPR001245 GO:0004672|GO:0006468
Prci13g2332 215 Gene3D Transferase(Phosphotransferase) domain 1 1 210 - -
Prci13g2332 215 SUPERFAMILY Protein kinase-like (PK-like) 1 199 IPR011009 -
Prci13g2332 215 ProSiteProfiles Protein kinase domain profile. 1 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2332 215 FunFam Pollen receptor-like kinase 1 1 205 - -
Prci13g2332 215 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 1 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2332 Prci-Chr13 37685334 37686714 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2332 1 197 Receptor kinase-like Gene Family AT3G51740 74.619 4.64e-107 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci13g2332 PK_Tyr_Ser-Thr 1.8e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2332 - - pcin:129290091 422.165