Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2315 ATGGAGATGGAGAACCAGATAAGTCTTCCTCATCTTCTGGAAGCCGTTGGAGAAGCCTTAGAGCAAGGACAGAACACACTTGCCCAAGTGATTCTGAGATGCATCAACCACAAAGCAAGCCCTCTTGGCGATCCTCTTGAACGTCTCTCATTCAAATTGTCCCAAAATCATGATACTTCAGAACAAGGGGCTTTCATCAAACAGGAAGCGTGCAAGAGCTTCCACAACGCTATCATGGCTATCTACCAAGGCATCCCACATGGCAGAATTGCTCATTTTGCAGCCAATTCAGCAATTCTAGGATCTATTACAGAGGATTCGGAACTCATAGACATAGTAGACTTTGATATGGGAGAAGGGGTTCAATGGCCTCCATTGATGGAGATTATTGCTCGTCAACATAAAACATTGAAATTAACGTCAATCAGATGGGAAGAAGAGGACAGCCTAGATGCCCATTTTGTTTCGACCCAGTGGAAATTTGAAGAAATCAGAAGGAACCTCTACCAGCATGCCAAATCATGTGGGTTGAAGTTGAAGGTGGAGGAACAGAGTATTGAGGAATTGGTGACGGAGCTCAAGATATTGAACAAAAAGGGTGGAAATGGAAATGGAAAGAGAAATTTCTTGGCCTTCAATTGCATGGTGGGTCTTCAACATATGGGTAGGACCAGAAGTAGAAGACACGTCTTAGAATTTCTGAGGGTGGCAAAGGAGTTCATCGAAAAAAGCTCATCTTTCAACAAGGGAATCATTGCTTTTGGTGATGGAGAAGCCTGTGAAAAACTCAGAAGCTGCAAGAACTTCAGATCATTCTTTAATGGGAGTTTAATGCACTACCATGCTTTGTTAGAATCAATAGAATCAGGTTTGCCAAGTGAATTCTCAGAGGCAAGAACAGCAATGGAGAGTCTGCCCGTGGCACCATATGTGTCCTGTGAGGGATGGTTTCAGAGATGGAAGGAGATGAGAGAAGATTGGATTAAGCTTCAATGA 996 0.4327 MEMENQISLPHLLEAVGEALEQGQNTLAQVILRCINHKASPLGDPLERLSFKLSQNHDTSEQGAFIKQEACKSFHNAIMAIYQGIPHGRIAHFAANSAILGSITEDSELIDIVDFDMGEGVQWPPLMEIIARQHKTLKLTSIRWEEEDSLDAHFVSTQWKFEEIRRNLYQHAKSCGLKLKVEEQSIEELVTELKILNKKGGNGNGKRNFLAFNCMVGLQHMGRTRSRRHVLEFLRVAKEFIEKSSSFNKGIIAFGDGEACEKLRSCKNFRSFFNGSLMHYHALLESIESGLPSEFSEARTAMESLPVAPYVSCEGWFQRWKEMREDWIKLQ 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2315 331 Coils Coil 179 199 - -
Prci13g2315 331 ProSiteProfiles GRAS family profile. 1 331 IPR005202 -
Prci13g2315 331 Pfam GRAS domain family 11 317 IPR005202 -
Prci13g2315 331 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 305 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2315 Prci-Chr13 37603845 37604840 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2315 4 151 GRAS Transcription Factor Family AT2G01570 29.630 1.78e-11 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci13g2315 GRAS 6.7e-29 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2315 - - pcin:129290090 655.981