Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2311 ATGGGGAATTGTTGTAGTGACAATGTTCCTCGTCAATATTCAATGGAAAATGAGGTGAATGAGAAGGAATTTGATCCCGTAGAGGACCATATTTCCATTTCCACATATGGTGAAGGTGAAGGGCGAGTCAGGCTAAGAGGACACTCTAGGTTTGTGTCAATGTACAGCCAGCAGGGAAGAAAAGAAGTCAATCAAGATGCAATGACAGTTTGGGAGGACTTCAATGGAGAAAAAGATAAGATCTTTTGTGGTGTGTTCGATGGTCACGGTCCTTTTGGGCATGTGGTTGCTCGATATGTACGCAAACATTTACCCTCAAAGCTTTCTGCAGCAATCAAAATGTCACAGCAAAAGGTCTTCATGCATAGAGATGCATATGCTGCAGAAGGTGAAAATCACCAAGCATTGTCCCTTGCTTCATGGGAGAACACCTTTTTGAAATCCTTCAACGAGATGGATCAAGCCATTGCTCGGGACATCAACACCAACAGTTTTTACAGCGGCAGCACTGCTGTAACTGTAATCAAACAGGGTGACCAGCTGATAATTGGCAATTTAGGTGATTCTCGAGCGGTTCTTTGCACGAGAGGGGCTAGAGATCAACTCATTCCTCTTCAACTTACTGTTGACTTGAAACCAGATATCCCAAGTGAAGCTGAAAGGATCCGCAGCTGTGAAGGCAGGGTTTTCGCTGAGGAAGAAGAGCCTGATGTGTACAGAATGTGGATGCCTGATGAAGACTGCCCTGGACTAGCTATGTCAAGAGCCTTTGGAGACTTTTGCTTAAAAGATTATGGCCTCATCTCATCTCCCGATGTCTTCTATCGAAGATTAACCGAGCAGGATGAATTTGTGGTTCTGGCCACTGATGGGGTTTGGGATGCATTGACAAATGATGAAGTTATAGAAATAGTTGCTTCAGCACCGAGGAGGTCCAGAGCGGCGAGATTGTTGGTAAAGCGAGCTGTGCAGGCATGGGATTATAAATTTCCTGGTGCCAAGGTTGATGATTGTGCAGCCATATGCTTGTTTCTGAAAGATCAGCCAGGCTTAACCAAATCTGGGGAAAATAGGCGTCAAAGGAAGCATTACCATGAATCTGCCAGAAATGAAGACACCAGAAGCTTAGACAGTTTAGTCTCTAAGGATGAATGGGTAGCTCTTAAAGGGTTATCCAGAGCCAACTCTATATCTAAACTTACCGGGCTCATTAGGGATGTGAACAGGAGGCATCCATCTCAGTTTCTTGAGGGAGTTGAAGTTCACTAG 1269 0.4468 MGNCCSDNVPRQYSMENEVNEKEFDPVEDHISISTYGEGEGRVRLRGHSRFVSMYSQQGRKEVNQDAMTVWEDFNGEKDKIFCGVFDGHGPFGHVVARYVRKHLPSKLSAAIKMSQQKVFMHRDAYAAEGENHQALSLASWENTFLKSFNEMDQAIARDINTNSFYSGSTAVTVIKQGDQLIIGNLGDSRAVLCTRGARDQLIPLQLTVDLKPDIPSEAERIRSCEGRVFAEEEEPDVYRMWMPDEDCPGLAMSRAFGDFCLKDYGLISSPDVFYRRLTEQDEFVVLATDGVWDALTNDEVIEIVASAPRRSRAARLLVKRAVQAWDYKFPGAKVDDCAAICLFLKDQPGLTKSGENRRQRKHYHESARNEDTRSLDSLVSKDEWVALKGLSRANSISKLTGLIRDVNRRHPSQFLEGVEVH 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2311 422 PANTHER PROTEIN PHOSPHATASE 50 343 IPR015655 GO:0004722|GO:0006470
Prci13g2311 422 ProSiteProfiles PPM-type phosphatase domain profile. 51 345 IPR001932 -
Prci13g2311 422 SUPERFAMILY PP2C-like 47 347 IPR036457 -
Prci13g2311 422 SMART PP2C_4 42 343 IPR001932 -
Prci13g2311 422 CDD PP2Cc 50 345 IPR001932 -
Prci13g2311 422 MobiDBLite consensus disorder prediction 354 375 - -
Prci13g2311 422 Pfam Protein phosphatase 2C 56 323 IPR001932 -
Prci13g2311 422 Gene3D - 45 348 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2311 Prci-Chr13 37560684 37563754 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2311 43 349 PP2C-type Phosphatase Gene Family AT5G01700 55.305 1.75e-120 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2311 - - gmx:100783603 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g2311 13 37560684 37563754 Prci12g0082 12 716152 719693 CCT
Prci13g2311 13 37560684 37563754 Prci13g2311 13 37560684 37563754 ECH