Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2307 ATGCCTCCCAGCCCTTCTCCCTCATTTGAATTCAAACCTCTCAAGACACAGCCTTTTATGACGACCTCTTTCACCGAGCTCCTTTCCATGGATGATCGCTGGCCTTCTTCTGAAATCCCCAAATTCAAGTCAACCCCTCCTCCTTCCTTGCCCCTCTCTCCCTCCCCTCTTTCTCCTTCTTCTTACTTGCCTTTTAGCCCTACCCAGTTCCTCAGCTCCCCCTTGTTCTCTTCATCCCCAAATGTTCTTCCTTCTGCTGAGACGTTTAATAACAAGGAGGACGAGGAGAAGCCATTCTCTGACTTCTCCTTCCAAACCCAATCGAAGCCCCCGTCCTTCTTGGAATATTCTTCAACCATGTTTCAAGCGGAACCACTGAAGATAGAACCATGGAATGAGAAGACAGCTGCAAAATCTGAGTATCCATCAAATCAGAGATTCTCCTCAGAACCTCAGATGCAAAACAATTTGGCTCCTGCTTCTGGTTATGCCAACTACGCGAATCCATCCCAATCCATAAGACTTCAAAAGAGGTCAGATGATGGGTACAACTGGAGAAAATATGGACAGAAACAGGTGAAGGCGAGCGAAAATCCTCGCAGCTATTACAAGTGCACGCATCCGAGTTGCTCCATGAAGAAGAAGGTTGAAACGTCTTTGGATGGACAAATTACTGAGATAGTATATAAGGGAACTCATAACCATCCCAAGCCTCAGTCCACTAGAAGATCTGGTTCTCAATCCATTCAACCTTCTTCATCTTGTACCAATTCCGGGATTTCTGATCAATCGGCGGTGACCCTAGGTAATCTACAAATGGAGCCGACCTCGATGCAAGAAGATTCTTCCGTCTCTGTTGGAGAAGATGACTTTGAGCACACATCACAAACCTGTTACTCTGGAGGCGATGACAATGACTTTGGCCCTGATGCCAAAAGATGGAAAGGAGAGAATGAAATTGATGGCTATGCCACCTCCGGGAATAGGACTGTGAGGGAACCAAGAGTCGTAGTTCAAACTACAAGTGAAATTGATATTCTTGATGATGGCTATAGGTGGAGGAAATATGGTCAGAAAGTAGTTAAAGGAAATCCAAACCCAAGGAGCTACTACAAGTGCACAGCTCCGGGGTGTTCGGTGAGGAAACATATCGAGCGAGCTGCTCATGATATGAAAGCTGTGATCACAACATATGAAGGGAAACACAACCATGATGTTCCTGCAGCTCGAGGAAGTGGGAGTTATAACATGACCGGAGCTTCTCGGAACAGCAACGCCACCAGCAACAATGTTACTGCACCCATAAGGCCATCAGCGGCTTCCGCGTTGAACAGTTTTTCCAGCACGTCAAGCTTAACAAATTCGCTTCATAACGCAAGCCAACCAACATCTGCAAGTCAAGATTCATTTCTATTTGACATGTTGCAGAGCCCAGCAAGTTTTGCATACTCTGATTTCGTCAGATCAATGGGATCGTATAACACTAACACATAA 1494 0.4585 MPPSPSPSFEFKPLKTQPFMTTSFTELLSMDDRWPSSEIPKFKSTPPPSLPLSPSPLSPSSYLPFSPTQFLSSPLFSSSPNVLPSAETFNNKEDEEKPFSDFSFQTQSKPPSFLEYSSTMFQAEPLKIEPWNEKTAAKSEYPSNQRFSSEPQMQNNLAPASGYANYANPSQSIRLQKRSDDGYNWRKYGQKQVKASENPRSYYKCTHPSCSMKKKVETSLDGQITEIVYKGTHNHPKPQSTRRSGSQSIQPSSSCTNSGISDQSAVTLGNLQMEPTSMQEDSSVSVGEDDFEHTSQTCYSGGDDNDFGPDAKRWKGENEIDGYATSGNRTVREPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTAPGCSVRKHIERAAHDMKAVITTYEGKHNHDVPAARGSGSYNMTGASRNSNATSNNVTAPIRPSAASALNSFSSTSSLTNSLHNASQPTSASQDSFLFDMLQSPASFAYSDFVRSMGSYNTNT 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2307 497 SUPERFAMILY WRKY DNA-binding domain 178 238 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci13g2307 497 ProSiteProfiles WRKY domain profile. 342 407 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci13g2307 497 SMART WRKY_cls 347 406 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci13g2307 497 SMART WRKY_cls 179 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci13g2307 497 MobiDBLite consensus disorder prediction 41 59 - -
Prci13g2307 497 SUPERFAMILY WRKY DNA-binding domain 339 407 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci13g2307 497 MobiDBLite consensus disorder prediction 274 308 - -
Prci13g2307 497 Gene3D WRKY domain 168 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci13g2307 497 MobiDBLite consensus disorder prediction 35 59 - -
Prci13g2307 497 MobiDBLite consensus disorder prediction 137 178 - -
Prci13g2307 497 MobiDBLite consensus disorder prediction 230 262 - -
Prci13g2307 497 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 73 436 IPR044810 GO:0003700
Prci13g2307 497 ProSiteProfiles WRKY domain profile. 180 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci13g2307 497 Pfam WRKY DNA -binding domain 348 404 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci13g2307 497 Pfam WRKY DNA -binding domain 180 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci13g2307 497 Gene3D WRKY domain 334 400 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci13g2307 497 MobiDBLite consensus disorder prediction 402 433 - -
Prci13g2307 497 FunFam WRKY transcription factor 169 239 - -
Prci13g2307 497 MobiDBLite consensus disorder prediction 83 106 - -
Prci13g2307 497 MobiDBLite consensus disorder prediction 274 302 - -
Prci13g2307 497 MobiDBLite consensus disorder prediction 137 179 - -
Prci13g2307 497 MobiDBLite consensus disorder prediction 414 433 - -
Prci13g2307 497 MobiDBLite consensus disorder prediction 234 262 - -
Prci13g2307 497 FunFam WRKY transcription factor 33 334 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2307 Prci-Chr13 37516338 37518979 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2307 38 458 WRKY Transcription Factor Family AT2G38470 48.753 7.79e-108 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci13g2307 WRKY 2.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2307 K13424 - gmx:100776837 533.102