Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2306 ATGCCTCCCAGCCCTTCTCCCTCATTTGAATTCAAACCTCTCAAGACACAGCCTTTTATGACGACCTCTTTCACCGAGCTCCTTTCCATGGATGATCGCTGGCCTTCTTCTGAAATCCCCAAATTCAAGTCAACCCCTCCTCCTTCCTTGCCCCTCTCTCCCTCCCCTCTTTCTCCTTCTTCTTACTTGCCTTTTAGCCCTACCCAGTTCCTCAGCTCCCCCTTGTTCTCTTCATCCCCAAATGTTCTTCCTTCTGCTGAGACGTTTAATAACAAGGAGGACGAGGAGAAGCCATTCTCTGACTTCTCCTTCCAAACCCAATCGAAGCCCCCGTCCTTCTTGGAATATTCTTCAACCATGTTTCAAGCGCAGGAACCACTGAAGATAGAACCATGGAATGAGAAGACAGCTGCAAAATCTGAGTATCCATCAAATCAGAGATTCTCCTCAGAACCTCAGATGCAAAACAATTTGGCTCCTGCTTCTGGTTATGCCAACTACGCGAATCCATCCCAATCCATAAGACTTCAAAAGAGGTCAGATGATGGGTACAACTGGAGAAAATATGGACAGAAACAGGTGAAGGCGAGCGAAAATCCTCGCAGCTATTACAAGTGCACGCATCCGAGTTGCTCCATGAAGAAGAAGGTTGAAACGTCTTTGGATGGACAAATTACTGAGATAGTATATAAGGGAACTCATAACCATCCCAAGCCTCAGTCCACTAGAAGATCTGGTTCTCAATCCATTCAACCTTCTTCATCTTGTACCAATTCCGGGATTTCTGATCAATCGGCGGTGACCCTAGGTAATCTACAAATGGAGCCGACCTCGATGCAAGAAGATTCTTCCGTCTCTGTTGGAGAAGATGACTTTGAGCACACATCACAAACCTGTTACTCTGGAGGCGATGACAATGACTTTGGCCCTGATGCCAAAAGATGGAAAGGAGAGAATGAAATTGATGGCTATGCCACCTCCGGGAATAGGACTGTGAGGGAACCAAGAGTCGTAGTTCAAACTACAAGTGAAATTGATATTCTTGATGATGGCTATAGGTGGAGGAAATATGGTCAGAAAGTAGTTAAAGGAAATCCAAACCCAAGGAGCTACTACAAGTGCACAGCTCCGGGGTGTTCGGTGAGGAAACATATCGAGCGAGCTGCTCATGATATGAAAGCTGTGATCACAACATATGAAGGGAAACACAACCATGATGTTCCTGCAGCTCGAGGAAGTGGGAGTTATAACATGACCGGAGCTTCTCGGAACAGCAACGCCACCAGCAACAATGTTACTGCACCCATAAGGCCATCAGCGGCTTCCGCGTTGAACAGTTTTTCCAGCACGTCAAGCTTAACAAATTCGCTTCATAACGCAAGCCAACCAACATCTGCAAGTCAAGATTCATTTCTATTTGACATGTTGCAGAGCCCAGCAAGTTTTGCATACTCTGATTTCGTCAGATCAATGGGATCGTATAACACTAACACATAA 1497 0.4589 MPPSPSPSFEFKPLKTQPFMTTSFTELLSMDDRWPSSEIPKFKSTPPPSLPLSPSPLSPSSYLPFSPTQFLSSPLFSSSPNVLPSAETFNNKEDEEKPFSDFSFQTQSKPPSFLEYSSTMFQAQEPLKIEPWNEKTAAKSEYPSNQRFSSEPQMQNNLAPASGYANYANPSQSIRLQKRSDDGYNWRKYGQKQVKASENPRSYYKCTHPSCSMKKKVETSLDGQITEIVYKGTHNHPKPQSTRRSGSQSIQPSSSCTNSGISDQSAVTLGNLQMEPTSMQEDSSVSVGEDDFEHTSQTCYSGGDDNDFGPDAKRWKGENEIDGYATSGNRTVREPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTAPGCSVRKHIERAAHDMKAVITTYEGKHNHDVPAARGSGSYNMTGASRNSNATSNNVTAPIRPSAASALNSFSSTSSLTNSLHNASQPTSASQDSFLFDMLQSPASFAYSDFVRSMGSYNTNT 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2306 498 MobiDBLite consensus disorder prediction 403 434 - -
Prci13g2306 498 MobiDBLite consensus disorder prediction 82 106 - -
Prci13g2306 498 FunFam WRKY transcription factor 170 240 - -
Prci13g2306 498 MobiDBLite consensus disorder prediction 415 434 - -
Prci13g2306 498 MobiDBLite consensus disorder prediction 275 307 - -
Prci13g2306 498 FunFam WRKY transcription factor 33 335 401 - -
Prci13g2306 498 ProSiteProfiles WRKY domain profile. 343 408 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci13g2306 498 MobiDBLite consensus disorder prediction 41 59 - -
Prci13g2306 498 SUPERFAMILY WRKY DNA-binding domain 340 408 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci13g2306 498 MobiDBLite consensus disorder prediction 231 263 - -
Prci13g2306 498 MobiDBLite consensus disorder prediction 35 59 - -
Prci13g2306 498 Pfam WRKY DNA -binding domain 181 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci13g2306 498 Pfam WRKY DNA -binding domain 349 405 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci13g2306 498 MobiDBLite consensus disorder prediction 138 172 - -
Prci13g2306 498 SMART WRKY_cls 180 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci13g2306 498 SMART WRKY_cls 348 407 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci13g2306 498 SUPERFAMILY WRKY DNA-binding domain 179 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci13g2306 498 Gene3D WRKY domain 335 401 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci13g2306 498 MobiDBLite consensus disorder prediction 136 172 - -
Prci13g2306 498 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 73 437 IPR044810 GO:0003700
Prci13g2306 498 MobiDBLite consensus disorder prediction 275 303 - -
Prci13g2306 498 MobiDBLite consensus disorder prediction 235 263 - -
Prci13g2306 498 Gene3D WRKY domain 169 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci13g2306 498 ProSiteProfiles WRKY domain profile. 181 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2306 Prci-Chr13 37516338 37518979 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2306 38 459 WRKY Transcription Factor Family AT2G38470 49.784 6.55e-108 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci13g2306 WRKY 2.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2306 K13424 - gmx:100776837 529.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g2306 13 37516338 37518979 Prci13g2306 13 37516338 37518979 ECH