Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2256 ATGCCAGATGGATTAAAGCTTCCTGTGAATAAAGCCTCAATTATTGTGGATGCATCCAAATACATAGAGGAGTTGAAGCAAAAAGTGGAGGGACTCAACGCAGAACTTGGAAGCAGCAGCACTGCTAGTGAATCTTCATCCTCCTCCCAAAATCAATTACCTAAGGTGACAGTGGAAACCCTAGAGAGGGGCTTCCTGATTAATGTGTTTTCTGAAAGGAATTGCCCAGGAATGCTCGTCTCAATACTCGAAGCCTTTGAGGTGCTTGGACTTGAAGTTCTTGATGCTAGGGTTTCTTGTGAAGACGCCTTTCAGCTAGAAGCTGTGGGAGGAGAAAGTCAAGAGATCGATGACATAGATGCACAAATGGTGAAGCAAGCGGTGCTACAAGCAATAAAGGACATGGAGTGA 411 0.4477 MPDGLKLPVNKASIIVDASKYIEELKQKVEGLNAELGSSSTASESSSSSQNQLPKVTVETLERGFLINVFSERNCPGMLVSILEAFEVLGLEVLDARVSCEDAFQLEAVGGESQEIDDIDAQMVKQAVLQAIKDME 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2256 136 Coils Coil 15 42 - -
Prci13g2256 136 MobiDBLite consensus disorder prediction 36 55 - -
Prci13g2256 136 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 9 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2256 Prci-Chr13 37215988 37217554 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2256 9 130 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 31.298 1.53e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2256 - - ccaj:109816195 190.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g2256 13 37215988 37217554 Prci2g2898 2 34235285 34237632 CCT
Prci13g2256 13 37215988 37217554 Prci13g2256 13 37215988 37217554 ECH
Prci13g2256 13 37215988 37217554 Prci2g1759 2 12953148 12954795 ECH
Prci13g2256 13 37215988 37217554 Prci8g0474 8 3072799 3074360 ECH
Prci8g0474 8 3072799 3074360 Prci13g2256 13 37215988 37217554 ECH