Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2255 ATGGCTTCGAGGGGGCGAAAGAAAGCTTCTCTCCATCACAAGTTACAGCAACTTCGAGATGTCACAAATTCTAGTGCTGTGAATAAAGCCTCAATTATTGTGGATGCATCCAAATACATAGAGGAGTTGAAGCAAAAAGTGGAGGGACTCAACGCAGAACTTGGAAGCAGCAGCACTGCTAGTGAATCTTCATCCTCCTCCCAAAATCAATTACCTAAGGTGACAGTGGAAACCCTAGAGAGGGGCTTCCTGATTAATGTGTTTTCTGAAAGGAATTGCCCAGGAATGCTCGTCTCAATACTCGAAGCCTTTGAGGTGCTTGGACTTGAAGTTCTTGATGCTAGGGTTTCTTGTGAAGACGCCTTTCAGCTAGAAGCTGTGGGAGGAGAAAGTCAAGAGATCGATGACATAGATGCACAAATGGTGAAGCAAGCGGTGCTACAAGCAATAAAGGACATGGAGTGA 465 0.4516 MASRGRKKASLHHKLQQLRDVTNSSAVNKASIIVDASKYIEELKQKVEGLNAELGSSSTASESSSSSQNQLPKVTVETLERGFLINVFSERNCPGMLVSILEAFEVLGLEVLDARVSCEDAFQLEAVGGESQEIDDIDAQMVKQAVLQAIKDME 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2255 154 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 151 - -
Prci13g2255 154 Coils Coil 33 60 - -
Prci13g2255 154 Gene3D - 4 69 IPR036638 GO:0046983
Prci13g2255 154 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 8 58 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2255 Prci-Chr13 37215988 37217764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2255 11 148 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 30.405 9.40e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2255 - - ccaj:109816195 221.476